Contribution and structural characterization of Chitinases to Clostridium perfringens Pathogenesis in Broilers
Bloch, Y., Dierick, E., Goossens, E., Savvides, S.N.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Chitinase B | 630 | Clostridium perfringens | Mutation(s): 0  Gene Names: CP4_3454, pNetB_00069 | ||
UniProt | |||||
Find proteins for F8UNI4 (Clostridium perfringens) Explore F8UNI4  Go to UniProtKB:  F8UNI4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F8UNI4 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
DW0 (Subject of Investigation/LOI) Query on DW0 | E [auth A], F [auth A] | 1,1'-PROPANE-1,3-DIYLBIS(3,7-DIMETHYL-3,7-DIHYDRO-1H-PURINE-2,6-DIONE) C17 H20 N8 O4 KEPIKAFUZRKZMT-UHFFFAOYSA-N | |||
CD Query on CD | C [auth A], D [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N | |||
CO Query on CO | B [auth A] | COBALT (II) ION Co XLJKHNWPARRRJB-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 67.401 | α = 90 |
b = 67.401 | β = 90 |
c = 355.823 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
PHASER | phasing |
XDS | data scaling |
Funding Organization | Location | Grant Number |
---|---|---|
Research Foundation - Flanders (FWO) | Belgium | -- |