8BY4 | pdb_00008by4

Crystal structure of Odorant Binding Protein 1 from Aedes albopictus (Asian tiger mosquito)

PDB DOI: https://doi.org/10.2210/pdb8BY4/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Aedes albopictus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2022-12-12 Released: 2023-10-18
Deposition Author(s): Liggri, P.G.V., Tsitsanou, K.E., Zographos, S.E.
Funding Organization(s): Other government

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free:
0.197 (Depositor), 0.211 (DCC)
R-Value Work:
0.164 (Depositor), 0.176 (DCC)
R-Value Observed:
0.166 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Odorant Binding Protein 1 from Aedes albopictus (Asian tiger mosquito)

Liggri, P.G.V., Tsitsanou, K.E., Zographos, S.E.

To be published.

Macromolecule Content

Total Structure Weight: 14.19 kDa
Atom Count: 1,068
Modeled Residue Count: 122
Deposited Residue Count: 122
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Odorant-binding protein 1	A	122	Aedes albopictus	Mutation(s): 0 Gene Names: 109422789, RP20_CCG014341, RP20_CCG027709
UniProt
Find proteins for H9A9Y0 (Aedes albopictus) Explore H9A9Y0 Go to UniProtKB: H9A9Y0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	H9A9Y0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.197 (Depositor), 0.211 (DCC)
R-Value Work: 0.164 (Depositor), 0.176 (DCC)
R-Value Observed: 0.166 (Depositor)

Space Group: P 3₁ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 81.337	α = 90
b = 81.337	β = 90
c = 63.844	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
SCALA	data scaling
MOLREP	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2023-10-18

Deposition Author(s):

Tsitsanou, K.E.

Zographos, S.E.

Funding Organization	Location	Grant Number
Other government	Greece	T1EDK-00996
Other government	Greece	MIS5000432

Revision History (Full details and data files)

Version 1.0: 2023-10-18
Type: Initial release
Version 1.1: 2024-11-20
Changes: Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.