Structure of human WDR5 and pVHL:ElonginC:ElonginB bound to PROTAC with PEG linker (conformation #2)
Kraemer, A., Doelle, A., Knapp, S., Structural Genomics Consortium (SGC)To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Calcium/calmodulin-dependent protein kinase type 1D | 385 | Homo sapiens | Mutation(s): 0  Gene Names: CAMK1D, CAMKID EC: 2.7.11.17 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8IU85 (Homo sapiens) Explore Q8IU85  Go to UniProtKB:  Q8IU85 | |||||
PHAROS:  Q8IU85 GTEx:  ENSG00000183049  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8IU85 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
QI6 (Subject of Investigation/LOI) Query on QI6 | D [auth A], E [auth A] | pyrazolo[5,1-a]phthalazin-6-amine C10 H8 N4 VOLKDTKFDOIYJN-UHFFFAOYSA-N | |||
SO4 Query on SO4 | B [auth A], C [auth A], F [auth A], G [auth A], H [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 57.531 | α = 90 |
b = 44.8 | β = 104.26 |
c = 108.589 | γ = 90 |
Software Name | Purpose |
---|---|
XDS | data reduction |
Aimless | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
The Structural Genomics Consortium (SGC) | Canada | -- |