7ZH7

Cryo-EM structure of ex vivo AA amyloid from renal tissue of a short hair cat deceased in a shelter


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: HELICAL ARRAY 
  • Reconstruction Method: HELICAL 

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Literature

Cryo-EM structure of ex vivo fibrils associated with extreme AA amyloidosis prevalence in a cat shelter.

Schulte, T.Chaves-Sanjuan, A.Mazzini, G.Speranzini, V.Lavatelli, F.Ferri, F.Palizzotto, C.Mazza, M.Milani, P.Nuvolone, M.Vogt, A.C.Vogel, M.Palladini, G.Merlini, G.Bolognesi, M.Ferro, S.Zini, E.Ricagno, S.

(2022) Nat Commun 13: 7041-7041

  • DOI: https://doi.org/10.1038/s41467-022-34743-2
  • Primary Citation of Related Structures:  
    7ZH7

  • PubMed Abstract: 

    AA amyloidosis is a systemic disease characterized by deposition of misfolded serum amyloid A protein (SAA) into cross-β amyloid in multiple organs in humans and animals. AA amyloidosis occurs at high SAA serum levels during chronic inflammation. Prion-like transmission was reported as possible cause of extreme AA amyloidosis prevalence in captive animals, e.g. 70% in cheetah and 57-73% in domestic short hair (DSH) cats kept in zoos and shelters, respectively. Herein, we present the 3.3 Å cryo-EM structure of AA amyloid extracted post-mortem from the kidney of a DSH cat with renal failure, deceased in a shelter with extreme disease prevalence. The structure reveals a cross-β architecture assembled from two 76-residue long proto-filaments. Despite >70% sequence homology to mouse and human SAA, the cat SAA variant adopts a distinct amyloid fold. Inclusion of an eight-residue insert unique to feline SAA contributes to increased amyloid stability. The presented feline AA amyloid structure is fully compatible with the 99% identical amino acid sequence of amyloid fragments of captive cheetah.


  • Organizational Affiliation

    Institute of Molecular and Translational Cardiology, IRCCS Policlinico San Donato, 20097, Milan, Italy.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Serum amyloid A protein
A, B, C, D, E
A, B, C, D, E, F, G, H, I, J
129Felis catusMutation(s): 0 
UniProt
Find proteins for Q1T770 (Felis catus)
Explore Q1T770 
Go to UniProtKB:  Q1T770
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ1T770
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: HELICAL ARRAY 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.19
RECONSTRUCTIONRELION3.1

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Italian Ministry of HealthItaly--

Revision History  (Full details and data files)

  • Version 1.0: 2022-11-30
    Type: Initial release