7YO2 | pdb_00007yo2

Cryo-EM structure of RCK1-RCK2 mutated human Slo1 apo

PDB DOI: https://doi.org/10.2210/pdb7YO2/pdb
EM Map EMD-33979: EMDB EMDataResource

Classification: TRANSPORT PROTEIN
Organism(s): Homo sapiens
Expression System: Homo sapiens
Mutation(s): Yes
Membrane Protein: Yes PDBTM

Deposited: 2022-08-01 Released: 2024-03-06
Deposition Author(s): Yamanouchi, D., Nureki, O.
Funding Organization(s): Japan Society for the Promotion of Science (JSPS)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 7YO2

This is version 1.1 of the entry. See complete history.

Literature

Structural basis for dual allosteric gating modulation of Slo1-LRRC channel complex

Yamanouchi, D.

To be published.

Macromolecule Content

Total Structure Weight: 475.51 kDa
Atom Count: 27,884
Modeled Residue Count: 3,512
Deposited Residue Count: 4,224
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Calcium-activated potassium channel subunit alpha-1	A, B, C, D	1,056	Homo sapiens	Mutation(s): 7 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for Q12791 (Homo sapiens) Explore Q12791 Go to UniProtKB: Q12791
PHAROS: Q12791 GTEx: ENSG00000156113
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q12791
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2024-03-06

Deposition Author(s):

Funding Organization	Location	Grant Number
Japan Society for the Promotion of Science (JSPS)	Japan	--

Revision History (Full details and data files)

Version 1.0: 2024-03-06
Type: Initial release
Version 1.1: 2025-06-18
Changes: Data collection, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.