7X27 | pdb_00007x27

MERS-CoV spike complex

PDB DOI: https://doi.org/10.2210/pdb7X27/pdb
EM Map EMD-32960: EMDB EMDataResource

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Middle East respiratory syndrome-related coronavirus
Expression System: Trichoplusia ni
Mutation(s): Yes

Deposited: 2022-02-25 Released: 2023-03-22
Deposition Author(s): Zeng, J.W., Zhang, S.Y., Wang, X.W.
Funding Organization(s): Ministry of Science and Technology (MoST, China)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 7X27

This is version 1.1 of the entry. See complete history.

Literature

cryo-EM structures of a human neutralizing antibody bound to MERS-CoV spike glycoprotein

Zhang, S.Y., Wang, X.W.

To be published.

Macromolecule Content

Total Structure Weight: 399.24 kDa
Atom Count: 22,770
Modeled Residue Count: 2,949
Deposited Residue Count: 3,636
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Spike glycoprotein	A [auth G], B [auth I], C [auth J]	1,212	Middle East respiratory syndrome-related coronavirus	Mutation(s): 3 Gene Names: S, 3
UniProt
Find proteins for K9N5Q8 (Middle East respiratory syndrome-related coronavirus (isolate United Kingdom/H123990006/2012)) Explore K9N5Q8 Go to UniProtKB: K9N5Q8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	K9N5Q8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2023-03-22

Deposition Author(s):

Funding Organization	Location	Grant Number
Ministry of Science and Technology (MoST, China)	China	2020YFC0845900

Revision History (Full details and data files)

Version 1.0: 2023-03-22
Type: Initial release
Version 1.1: 2024-11-13
Changes: Data collection, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.