7W6K

Cryo-EM structure of GmALMT12/QUAC1 anion channel


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

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Literature

Cryo-EM structure and electrophysiological characterization of ALMT from Glycine max reveal a previously uncharacterized class of anion channels.

Qin, L.Tang, L.H.Xu, J.S.Zhang, X.H.Zhu, Y.Zhang, C.R.Wang, M.H.Liu, X.L.Li, F.Sun, F.Su, M.Zhai, Y.Chen, Y.H.

(2022) Sci Adv 8: eabm3238-eabm3238

  • DOI: https://doi.org/10.1126/sciadv.abm3238
  • Primary Citation of Related Structures:  
    7W6K

  • PubMed Abstract: 

    Aluminum-activated malate transporters (ALMTs) form an anion channel family that plays essential roles in diverse functions in plants. Arabidopsis ALMT12, also named QUAC1 (quick anion channel 1), regulates stomatal closure in response to environmental stimuli. However, the molecular basis of ALMT12/QUAC1 activity remains elusive. Here, we describe the cryo-EM structure of ALMT12/QUAC1 from Glycine max at 3.5-Å resolution. Gm ALMT12/QUAC1 is a symmetrical dimer, forming a single electropositive T-shaped pore across the membrane. The transmembrane and cytoplasmic domains are assembled into a twisted two-layer architecture, with their associated dimeric interfaces nearly perpendicular. Gm ALMT12/QUAC1-mediated currents display rapid kinetics of activation/deactivation and a bell-shaped voltage dependency, reminiscent of the rapid (R)-type anion currents. Our structural and functional analyses reveal a domain-twisting mechanism for malate-mediated activation. Together, our study uncovers the molecular basis for a previously uncharacterized class of anion channels and provides insights into the gating and modulation of the ALMT12/QUAC1 anion channel.


  • Organizational Affiliation

    State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
GmALMT12/QUAC1
A, B
537Glycine maxMutation(s): 0 
Gene Names: GLYMA_01G199400
Membrane Entity: Yes 
UniProt
Find proteins for I1J9K0 (Glycine max)
Explore I1J9K0 
Go to UniProtKB:  I1J9K0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupI1J9K0
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC3.1
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Science and Technology (MoST, China)China2020YFA0509903, 2016YFA0500503, 2017YFA0504703
Chinese Academy of SciencesChinaXDA24020305, XDB37040102, 153E11KYSB20190029
National Natural Science Foundation of China (NSFC)China31872721, 31771566

Revision History  (Full details and data files)

  • Version 1.0: 2022-03-16
    Type: Initial release