7VYV

Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.32 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history. 


Literature

Depo32, a depolymerase of Klebsiella phage, efficiently controls infection caused by Klebsiella pneumoniae with K2 serotype CPS

Cai, R., Ren, Z., Zhao, R., Wang, X., Guo, Z., Du, R., Han, W., Ru, H., Gu, J.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Depolymerase
A, B, C
907Klebsiella phage GH-K3Mutation(s): 0 
Gene Names: GHK3_32
UniProt
Find proteins for A0A3S7W7I3 (Klebsiella phage GH-K3)
Explore A0A3S7W7I3 
Go to UniProtKB:  A0A3S7W7I3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A3S7W7I3
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.32 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China32072824
National Natural Science Foundation of China (NSFC)China31872505
National Natural Science Foundation of China (NSFC)ChinaU19A2038

Revision History  (Full details and data files)

  • Version 1.0: 2023-08-30
    Type: Initial release