Toxin/immunity complex for a T6SS lipase effector from E. cloacae
Cuthbert, B.J., Goulding, C.W., Hayes, C.S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ankyrin repeat domain-containing protein | A, B [auth C] | 230 | Enterobacter cloacae | Mutation(s): 0  Gene Names: I6L61_16350 | |
UniProt | |||||
Find proteins for A0A0H3CKN4 (Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)) Explore A0A0H3CKN4  Go to UniProtKB:  A0A0H3CKN4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H3CKN4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
T6SS lipase effector | C [auth B], D | 313 | Enterobacter cloacae | Mutation(s): 0  Gene Names: NCTC10005_04014 | |
UniProt | |||||
Find proteins for A0A0M7ENE2 (Enterobacter cloacae) Explore A0A0M7ENE2  Go to UniProtKB:  A0A0M7ENE2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0M7ENE2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FLC Query on FLC | H [auth C] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K | |||
GOL Query on GOL | E [auth A] F [auth A] G [auth A] I [auth C] J [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MIE (Subject of Investigation/LOI) Query on MIE | K [auth B], N [auth D] | methylglyoxal C3 H4 O2 AIJULSRZWUXGPQ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 87.172 | α = 90 |
b = 120.493 | β = 90 |
c = 122.804 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | GM117930 |