7TL6

Murine meteorin N-terminal CUB domain

PDB DOI: https://doi.org/10.2210/pdb7TL6/pdb

Classification: SIGNALING PROTEIN
Organism(s): Mus musculus
Expression System: Cricetulus griseus
Mutation(s): No

Deposited: 2022-01-18 Released: 2023-01-25
Deposition Author(s): Quan, C., Arndt, J.W., Pepinsky, B., Gong, B.J., Dolnikova, J.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.292
R-Value Work: 0.252
R-Value Observed: 0.254

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Identification and structure determination of stable domains of meteorin and meteorin-like

Quan, C., Arndt, J.W., Pepinsky, R.B., Gong, B.J., Dolnikova, J.

To be published.

Macromolecule Content

Total Structure Weight: 29.78 kDa
Atom Count: 1,760
Modelled Residue Count: 239
Deposited Residue Count: 268
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Meteorin	A, B	134	Mus musculus	Mutation(s): 0 Gene Names: Metrn, Hyrac
UniProt & NIH Common Fund Data Resources
Find proteins for Q8C1Q4 (Mus musculus) Explore Q8C1Q4 Go to UniProtKB: Q8C1Q4
IMPC: MGI:1917333
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q8C1Q4
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain C [auth A] MOL2 format, chain C [auth A] mmCIF format, chain C [auth A]	C [auth A]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Interactions Focus chain C [auth A]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.292
R-Value Work: 0.252
R-Value Observed: 0.254
Space Group: P 4₃ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 48.508	α = 90
b = 48.508	β = 90
c = 191.542	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction
autoPROC	data reduction
SCALA	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-01-25

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded	United States	--

Revision History (Full details and data files)

Version 1.0: 2023-01-25
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.