Phaeosphaeria nodorum M36 protease without the propeptide
Wilkens, C., Qiu, J., Meyer, A.S., Morth, J.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Extracellular metalloproteinase | 391 | Pseudogymnoascus pannorum | Mutation(s): 0  EC: 3.4.24 | ||
UniProt | |||||
Find proteins for A0A1B8GTG7 (Pseudogymnoascus verrucosus) Explore A0A1B8GTG7  Go to UniProtKB:  A0A1B8GTG7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A1B8GTG7 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | |||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EPE Query on EPE | B [auth A] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N | |||
A2G Query on A2G | C [auth A] | 2-acetamido-2-deoxy-alpha-D-galactopyranose C8 H15 N O6 OVRNDRQMDRJTHS-CBQIKETKSA-N | |||
ZN (Subject of Investigation/LOI) Query on ZN | D [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CA Query on CA | E [auth A], F [auth A], G [auth A], H [auth A], I [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 39.08 | α = 90 |
b = 67.49 | β = 90 |
c = 130.61 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
MxCuBE | data collection |
Coot | model building |
PHASER | phasing |
XDS | data scaling |
XDS | data reduction |
Funding Organization | Location | Grant Number |
---|---|---|
Chinese Scholarship Council | 201806910049 | |
Other government | Denmark | -- |