Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH011247
Davies, J.R., Scaletti, E.R., Stenmark, P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
N-glycosylase/DNA lyase | A [auth AAA], B [auth BBB], C [auth CCC] | 318 | Mus musculus | Mutation(s): 0  Gene Names: Ogg1 EC: 3.2.2 (PDB Primary Data), 4.2.99.18 (PDB Primary Data) | ![]() |
UniProt | |||||
Find proteins for O08760 (Mus musculus) Explore O08760  Go to UniProtKB:  O08760 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O08760 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AUS (Subject of Investigation/LOI) Query on AUS | D [auth AAA], F [auth BBB], G [auth CCC] | (2~{R})-~{N}-(4,5,6,7-tetrahydro-1,2-benzoxazol-3-yl)spiro[2.3]hexane-2-carboxamide C14 H18 N2 O2 LRTIDDCMWUKSQP-JTQLQIEISA-N | |||
NI Query on NI | E [auth AAA] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 81.35 | α = 90 |
b = 81.397 | β = 90 |
c = 168.405 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Swedish Research Council | Sweden | -- |
Cancerfonden | Sweden | -- |