Crystal structure of the N-terminal endonuclease domain of La Crosse virus L-protein bound to compound Baloxavir
Feracci, M., Hernandez, S., Vincentelli, R., Ferron, F., Reguera, J., Canard, B., Alvarez, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
RNA-directed RNA polymerase L | A [auth AAA], B [auth BBB], C [auth DDD], D [auth GGG] | 184 | La Crosse virus | Mutation(s): 0  EC: 2.7.7.48 (PDB Primary Data), 3.1 (PDB Primary Data) | |
UniProt | |||||
Find proteins for A5HC98 (Bunyavirus La Crosse) Explore A5HC98  Go to UniProtKB:  A5HC98 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A5HC98 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
E4Z (Subject of Investigation/LOI) Query on E4Z | E [auth AAA], O [auth DDD], S [auth GGG] | Baloxavir acid C24 H19 F2 N3 O4 S FIDLLEYNNRGVFR-CTNGQTDRSA-N | |||
GOL Query on GOL | G [auth AAA] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MN Query on MN | I [auth AAA] J [auth AAA] K [auth AAA] L [auth BBB] M [auth BBB] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N | |||
FMT Query on FMT | F [auth AAA], H [auth AAA], P [auth DDD], T [auth GGG] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 124.738 | α = 90 |
b = 124.738 | β = 90 |
c = 295.25 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
xia2 | data reduction |
DIALS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Agence Nationale de la Recherche (ANR) | France | ANR-18-ASTR-0010-01, PaNuVi |