7OEQ | pdb_00007oeq

Mevalonyl-coenzyme A hydratase (Sid H)

PDB DOI: https://doi.org/10.2210/pdb7OEQ/pdb

Classification: LYASE
Organism(s): Aspergillus fumigatus Af293
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2021-05-03 Released: 2022-06-01
Deposition Author(s): Poonsiri, T., Demitri, N., Benini, S.
Funding Organization(s): European Regional Development Fund

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.36 Å
R-Value Free:
0.181 (Depositor), 0.182 (DCC)
R-Value Work:
0.149 (Depositor), 0.149 (DCC)
R-Value Observed:
0.150 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

Mevalonyl-coenzyme A hydratase (Sid H)

Poonsiri, T., Demitri, N., Benini, S.

To be published.

Macromolecule Content

Total Structure Weight: 29.38 kDa
Atom Count: 2,185
Modeled Residue Count: 259
Deposited Residue Count: 270
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Mevalonyl-coenzyme A hydratase sidH	A	270	Aspergillus fumigatus Af293	Mutation(s): 0 Gene Names: sidH, AFUA_3G03410 EC: 4.2.1
UniProt
Find proteins for Q4WF54 (Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)) Explore Q4WF54 Go to UniProtKB: Q4WF54
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q4WF54
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.36 Å
R-Value Free: 0.181 (Depositor), 0.182 (DCC)
R-Value Work: 0.149 (Depositor), 0.149 (DCC)
R-Value Observed: 0.150 (Depositor)

Space Group: P 3 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 107.564	α = 90
b = 107.564	β = 90
c = 48.326	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
Aimless	data scaling
PHASER	phasing
PDB_EXTRACT	data extraction
XDS	data reduction

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2022-06-01

Deposition Author(s):

Funding Organization	Location	Grant Number
European Regional Development Fund	Italy	IPN95

Revision History (Full details and data files)

Version 1.0: 2022-06-01
Type: Initial release
Version 1.1: 2024-05-01
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.