7MTX

Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P176


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.44 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.180 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with IMP and the inhibitor P176

Kim, Y.Maltseva, N.Makowska-Grzyska, M.Gu, M.Gollapalli, D.Hedstrom, L.Anderson, W.F.Joachimiak, A.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Inosine-5'-monophosphate dehydrogenase
A, B, C, D, E
A, B, C, D, E, F, G, H
384Bacillus anthracisMutation(s): 0 
Gene Names: guaBBA_0008A9486_01210ABW01_29210BVG01_30935COL95_27530
EC: 1.1.1.205
UniProt
Find proteins for A0A6L8P2U9 (Bacillus anthracis)
Explore A0A6L8P2U9 
Go to UniProtKB:  A0A6L8P2U9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A6L8P2U9
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ZO4 (Subject of Investigation/LOI)
Query on ZO4

Download Ideal Coordinates CCD File 
CA [auth G]
FA [auth H]
J [auth A]
M [auth B]
Q [auth C]
CA [auth G],
FA [auth H],
J [auth A],
M [auth B],
Q [auth C],
T [auth D],
V [auth E],
Y [auth F]
N-{2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenyl}-beta-D-ribopyranosylamine
C24 H30 Cl N3 O5
AFRUCARRYXUVSH-GXRSIYKFSA-N
IMP
Query on IMP

Download Ideal Coordinates CCD File 
BA [auth G]
EA [auth H]
I [auth A]
L [auth B]
P [auth C]
BA [auth G],
EA [auth H],
I [auth A],
L [auth B],
P [auth C],
S [auth D],
U [auth E],
X [auth F]
INOSINIC ACID
C10 H13 N4 O8 P
GRSZFWQUAKGDAV-KQYNXXCUSA-N
K
Query on K

Download Ideal Coordinates CCD File 
AA [auth G]
DA [auth H]
K [auth A]
N [auth B]
O [auth C]
AA [auth G],
DA [auth H],
K [auth A],
N [auth B],
O [auth C],
R [auth D],
W [auth E],
Z [auth F]
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.44 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.180 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 85.39α = 81.413
b = 89.921β = 90.03
c = 104.856γ = 83.443
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
HKL-3000phasing
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2021-06-09
    Type: Initial release
  • Version 1.1: 2023-10-18
    Changes: Data collection, Database references, Refinement description