Download MendeleyCrystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
Cherakara, S., Kumar, A., Garai, K., Ghosh, B.To be published.
7FCS
Crystal structure of the N-terminal domain of mutants of Human Apolipoprotein-E (ApoE)
- PDB DOI: https://doi.org/10.2210/pdb7FCS/pdb
- Classification: LIPID TRANSPORT
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2021-07-15 Released: 2022-07-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.216
- R-Value Work: 0.188
- R-Value Observed: 0.190
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Apolipoprotein E | 193 | Homo sapiens | Mutation(s): 1 Gene Names: APOE |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P02649 (Homo sapiens) Explore P02649 Go to UniProtKB: P02649 | |||||
PHAROS: P02649 GTEx: ENSG00000130203 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02649 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NA Query on NA | B [auth A], C [auth A], D [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.216
- R-Value Work: 0.188
- R-Value Observed: 0.190
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 40.87 | α = 90 |
| b = 53.493 | β = 90 |
| c = 85.776 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2022-07-20 Deposition Author(s): Cherakara, S., Kumar, A., Garai, K., Ghosh, B.
Revision History (Full details and data files)
- Version 1.0: 2022-07-20
Type: Initial release - Version 1.1: 2023-11-29
Changes: Data collection, Refinement description
