7F05

Crystal structure of human cardiac calsequestrin bound with calcium

PDB DOI: https://doi.org/10.2210/pdb7F05/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2021-06-03 Released: 2022-06-08
Deposition Author(s): Fan, X.X., Liu, X.X., Su, X.D., Wang, S.Q.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.234
R-Value Work: 0.208
R-Value Observed: 0.209

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Ca2+-dependent Formation of a Non-transmembrane Channel in a Calsequestrin-2 Dimer

Fan, X.X., Liu, Z.H., Yu, H., Liu, X.Y., Li, L.L., Wang, L.P., Li, H.T., Huang, X.Y., Xu, Z., Su, X.D., Song, C., Guo, X.F., Wang, S.Q.

To be published.

Macromolecule Content

Total Structure Weight: 190.17 kDa
Atom Count: 12,424
Modelled Residue Count: 1,400
Deposited Residue Count: 1,612
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Calsequestrin-2	A, B [auth C], C [auth B], D	403	Homo sapiens	Mutation(s): 0 Gene Names: CASQ2
UniProt & NIH Common Fund Data Resources
Find proteins for O14958 (Homo sapiens) Explore O14958 Go to UniProtKB: O14958
PHAROS: O14958 GTEx: ENSG00000118729
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O14958
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CA (Subject of Investigation/LOI) Query on CA Download Ideal Coordinates CCD File SDF format, chain AA [auth C] SDF format, chain AB [auth B] SDF format, chain BA [auth C] SDF format, chain BB [auth B] SDF format, chain CA [auth C] SDF format, chain CB [auth B] SDF format, chain DA [auth C] SDF format, chain DB [auth B] SDF format, chain E [auth A] SDF format, chain EA [auth C] SDF format, chain EB [auth B] SDF format, chain F [auth A] SDF format, chain FA [auth C] SDF format, chain FB [auth B] SDF format, chain G [auth A] SDF format, chain GA [auth C] SDF format, chain GB [auth B] SDF format, chain H [auth A] SDF format, chain HA [auth C] SDF format, chain HB [auth B] SDF format, chain I [auth A] SDF format, chain IA [auth C] SDF format, chain IB [auth B] SDF format, chain J [auth A] SDF format, chain JA [auth C] SDF format, chain JB [auth B] SDF format, chain K [auth A] SDF format, chain KA [auth C] SDF format, chain KB [auth B] SDF format, chain L [auth A] SDF format, chain LA [auth C] SDF format, chain LB [auth B] SDF format, chain M [auth A] SDF format, chain MA [auth C] SDF format, chain MB [auth D] SDF format, chain N [auth A] SDF format, chain NA [auth C] SDF format, chain NB [auth D] SDF format, chain O [auth A] SDF format, chain OA [auth C] SDF format, chain OB [auth D] SDF format, chain P [auth A] SDF format, chain PA [auth C] SDF format, chain PB [auth D] SDF format, chain Q [auth A] SDF format, chain QA [auth C] SDF format, chain QB [auth D] SDF format, chain R [auth A] SDF format, chain RA [auth C] SDF format, chain RB [auth D] SDF format, chain S [auth A] SDF format, chain SA [auth C] SDF format, chain SB [auth D] SDF format, chain T [auth A] SDF format, chain TA [auth C] SDF format, chain TB [auth D] SDF format, chain U [auth A] SDF format, chain UA [auth B] SDF format, chain UB [auth D] SDF format, chain V [auth A] SDF format, chain VA [auth B] SDF format, chain VB [auth D] SDF format, chain W [auth A] SDF format, chain WA [auth B] SDF format, chain WB [auth D] SDF format, chain X [auth A] SDF format, chain XA [auth B] SDF format, chain XB [auth D] SDF format, chain Y [auth C] SDF format, chain YA [auth B] SDF format, chain YB [auth D] SDF format, chain Z [auth C] SDF format, chain ZA [auth B] SDF format, chain ZB [auth D] MOL2 format, chain AA [auth C] MOL2 format, chain AB [auth B] MOL2 format, chain BA [auth C] MOL2 format, chain BB [auth B] MOL2 format, chain CA [auth C] MOL2 format, chain CB [auth B] MOL2 format, chain DA [auth C] MOL2 format, chain DB [auth B] MOL2 format, chain E [auth A] MOL2 format, chain EA [auth C] MOL2 format, chain EB [auth B] MOL2 format, chain F [auth A] MOL2 format, chain FA [auth C] MOL2 format, chain FB [auth B] MOL2 format, chain G [auth A] MOL2 format, chain GA [auth C] MOL2 format, chain GB [auth B] MOL2 format, chain H [auth A] MOL2 format, chain HA [auth C] MOL2 format, chain HB [auth B] MOL2 format, chain I [auth A] MOL2 format, chain IA [auth C] MOL2 format, chain IB [auth B] MOL2 format, chain J [auth A] MOL2 format, chain JA [auth C] MOL2 format, chain JB [auth B] MOL2 format, chain K [auth A] MOL2 format, chain KA [auth C] MOL2 format, chain KB [auth B] MOL2 format, chain L [auth A] MOL2 format, chain LA [auth C] MOL2 format, chain LB [auth B] MOL2 format, chain M [auth A] MOL2 format, chain MA [auth C] MOL2 format, chain MB [auth D] MOL2 format, chain N [auth A] MOL2 format, chain NA [auth C] MOL2 format, chain NB [auth D] MOL2 format, chain O [auth A] MOL2 format, chain OA [auth C] MOL2 format, chain OB [auth D] MOL2 format, chain P [auth A] MOL2 format, chain PA [auth C] MOL2 format, chain PB [auth D] MOL2 format, chain Q [auth A] MOL2 format, chain QA [auth C] MOL2 format, chain QB [auth D] MOL2 format, chain R [auth A] MOL2 format, chain RA [auth C] MOL2 format, chain RB [auth D] MOL2 format, chain S [auth A] MOL2 format, chain SA [auth C] MOL2 format, chain SB [auth D] MOL2 format, chain T [auth A] MOL2 format, chain TA [auth C] MOL2 format, chain TB [auth D] MOL2 format, chain U [auth A] MOL2 format, chain UA [auth B] MOL2 format, chain UB [auth D] MOL2 format, chain V [auth A] MOL2 format, chain VA [auth B] MOL2 format, chain VB [auth D] MOL2 format, chain W [auth A] MOL2 format, chain WA [auth B] MOL2 format, chain WB [auth D] MOL2 format, chain X [auth A] MOL2 format, chain XA [auth B] MOL2 format, chain XB [auth D] MOL2 format, chain Y [auth C] MOL2 format, chain YA [auth B] MOL2 format, chain YB [auth D] MOL2 format, chain Z [auth C] MOL2 format, chain ZA [auth B] MOL2 format, chain ZB [auth D] mmCIF format, chain AA [auth C] mmCIF format, chain AB [auth B] mmCIF format, chain BA [auth C] mmCIF format, chain BB [auth B] mmCIF format, chain CA [auth C] mmCIF format, chain CB [auth B] mmCIF format, chain DA [auth C] mmCIF format, chain DB [auth B] mmCIF format, chain E [auth A] mmCIF format, chain EA [auth C] mmCIF format, chain EB [auth B] mmCIF format, chain F [auth A] mmCIF format, chain FA [auth C] mmCIF format, chain FB [auth B] mmCIF format, chain G [auth A] mmCIF format, chain GA [auth C] mmCIF format, chain GB [auth B] mmCIF format, chain H [auth A] mmCIF format, chain HA [auth C] mmCIF format, chain HB [auth B] mmCIF format, chain I [auth A] mmCIF format, chain IA [auth C] mmCIF format, chain IB [auth B] mmCIF format, chain J [auth A] mmCIF format, chain JA [auth C] mmCIF format, chain JB [auth B] mmCIF format, chain K [auth A] mmCIF format, chain KA [auth C] mmCIF format, chain KB [auth B] mmCIF format, chain L [auth A] mmCIF format, chain LA [auth C] mmCIF format, chain LB [auth B] mmCIF format, chain M [auth A] mmCIF format, chain MA [auth C] mmCIF format, chain MB [auth D] mmCIF format, chain N [auth A] mmCIF format, chain NA [auth C] mmCIF format, chain NB [auth D] mmCIF format, chain O [auth A] mmCIF format, chain OA [auth C] mmCIF format, chain OB [auth D] mmCIF format, chain P [auth A] mmCIF format, chain PA [auth C] mmCIF format, chain PB [auth D] mmCIF format, chain Q [auth A] mmCIF format, chain QA [auth C] mmCIF format, chain QB [auth D] mmCIF format, chain R [auth A] mmCIF format, chain RA [auth C] mmCIF format, chain RB [auth D] mmCIF format, chain S [auth A] mmCIF format, chain SA [auth C] mmCIF format, chain SB [auth D] mmCIF format, chain T [auth A] mmCIF format, chain TA [auth C] mmCIF format, chain TB [auth D] mmCIF format, chain U [auth A] mmCIF format, chain UA [auth B] mmCIF format, chain UB [auth D] mmCIF format, chain V [auth A] mmCIF format, chain VA [auth B] mmCIF format, chain VB [auth D] mmCIF format, chain W [auth A] mmCIF format, chain WA [auth B] mmCIF format, chain WB [auth D] mmCIF format, chain X [auth A] mmCIF format, chain XA [auth B] mmCIF format, chain XB [auth D] mmCIF format, chain Y [auth C] mmCIF format, chain YA [auth B] mmCIF format, chain YB [auth D] mmCIF format, chain Z [auth C] mmCIF format, chain ZA [auth B] mmCIF format, chain ZB [auth D]	AA [auth C] AB [auth B] BA [auth C] BB [auth B] CA [auth C] AA [auth C], AB [auth B], BA [auth C], BB [auth B], CA [auth C], CB [auth B], DA [auth C], DB [auth B], E [auth A], EA [auth C], EB [auth B], F [auth A], FA [auth C], FB [auth B], G [auth A], GA [auth C], GB [auth B], H [auth A], HA [auth C], HB [auth B], I [auth A], IA [auth C], IB [auth B], J [auth A], JA [auth C], JB [auth B], K [auth A], KA [auth C], KB [auth B], L [auth A], LA [auth C], LB [auth B], M [auth A], MA [auth C], MB [auth D], N [auth A], NA [auth C], NB [auth D], O [auth A], OA [auth C], OB [auth D], P [auth A], PA [auth C], PB [auth D], Q [auth A], QA [auth C], QB [auth D], R [auth A], RA [auth C], RB [auth D], S [auth A], SA [auth C], SB [auth D], T [auth A], TA [auth C], TB [auth D], U [auth A], UA [auth B], UB [auth D], V [auth A], VA [auth B], VB [auth D], W [auth A], WA [auth B], WB [auth D], X [auth A], XA [auth B], XB [auth D], Y [auth C], YA [auth B], YB [auth D], Z [auth C], ZA [auth B], ZB [auth D]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Interactions Focus chain AA [auth C] Focus chain AB [auth B] Focus chain BA [auth C] Focus chain BB [auth B] Focus chain CA [auth C] Focus chain CB [auth B] Focus chain DA [auth C] Focus chain DB [auth B] Focus chain E [auth A] Focus chain EA [auth C] Focus chain EB [auth B] Focus chain F [auth A] Focus chain FA [auth C] Focus chain FB [auth B] Focus chain G [auth A] Focus chain GA [auth C] Focus chain GB [auth B] Focus chain H [auth A] Focus chain HA [auth C] Focus chain HB [auth B] Focus chain I [auth A] Focus chain IA [auth C] Focus chain IB [auth B] Focus chain J [auth A] Focus chain JA [auth C] Focus chain JB [auth B] Focus chain K [auth A] Focus chain KA [auth C] Focus chain KB [auth B] Focus chain L [auth A] Focus chain LA [auth C] Focus chain LB [auth B] Focus chain M [auth A] Focus chain MA [auth C] Focus chain MB [auth D] Focus chain N [auth A] Focus chain NA [auth C] Focus chain NB [auth D] Focus chain O [auth A] Focus chain OA [auth C] Focus chain OB [auth D] Focus chain P [auth A] Focus chain PA [auth C] Focus chain PB [auth D] Focus chain Q [auth A] Focus chain QA [auth C] Focus chain QB [auth D] Focus chain R [auth A] Focus chain RA [auth C] Focus chain RB [auth D] Focus chain S [auth A] Focus chain SA [auth C] Focus chain SB [auth D] Focus chain T [auth A] Focus chain TA [auth C] Focus chain TB [auth D] Focus chain U [auth A] Focus chain UA [auth B] Focus chain UB [auth D] Focus chain V [auth A] Focus chain VA [auth B] Focus chain VB [auth D] Focus chain W [auth A] Focus chain WA [auth B] Focus chain WB [auth D] Focus chain X [auth A] Focus chain XA [auth B] Focus chain XB [auth D] Focus chain Y [auth C] Focus chain YA [auth B] Focus chain YB [auth D] Focus chain Z [auth C] Focus chain ZA [auth B] Focus chain ZB [auth D] Interactions & Density Focus chain AA [auth C] Focus chain AB [auth B] Focus chain BA [auth C] Focus chain BB [auth B] Focus chain CA [auth C] Focus chain CB [auth B] Focus chain DA [auth C] Focus chain DB [auth B] Focus chain E [auth A] Focus chain EA [auth C] Focus chain EB [auth B] Focus chain F [auth A] Focus chain FA [auth C] Focus chain FB [auth B] Focus chain G [auth A] Focus chain GA [auth C] Focus chain GB [auth B] Focus chain H [auth A] Focus chain HA [auth C] Focus chain HB [auth B] Focus chain I [auth A] Focus chain IA [auth C] Focus chain IB [auth B] Focus chain J [auth A] Focus chain JA [auth C] Focus chain JB [auth B] Focus chain K [auth A] Focus chain KA [auth C] Focus chain KB [auth B] Focus chain L [auth A] Focus chain LA [auth C] Focus chain LB [auth B] Focus chain M [auth A] Focus chain MA [auth C] Focus chain MB [auth D] Focus chain N [auth A] Focus chain NA [auth C] Focus chain NB [auth D] Focus chain O [auth A] Focus chain OA [auth C] Focus chain OB [auth D] Focus chain P [auth A] Focus chain PA [auth C] Focus chain PB [auth D] Focus chain Q [auth A] Focus chain QA [auth C] Focus chain QB [auth D] Focus chain R [auth A] Focus chain RA [auth C] Focus chain RB [auth D] Focus chain S [auth A] Focus chain SA [auth C] Focus chain SB [auth D] Focus chain T [auth A] Focus chain TA [auth C] Focus chain TB [auth D] Focus chain U [auth A] Focus chain UA [auth B] Focus chain UB [auth D] Focus chain V [auth A] Focus chain VA [auth B] Focus chain VB [auth D] Focus chain W [auth A] Focus chain WA [auth B] Focus chain WB [auth D] Focus chain X [auth A] Focus chain XA [auth B] Focus chain XB [auth D] Focus chain Y [auth C] Focus chain YA [auth B] Focus chain YB [auth D] Focus chain Z [auth C] Focus chain ZA [auth B] Focus chain ZB [auth D]