Download MendeleyCrystal structure of CnYvh1 complex with vanadate
Choi, M.K., Yoo, Y.To be published.
7EZN
Crystal structure of CnYvh1 complex with vanadate
- PDB DOI: https://doi.org/10.2210/pdb7EZN/pdb
- Classification: HYDROLASE
- Organism(s): Cryptococcus neoformans var. grubii H99
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2021-06-01 Released: 2022-06-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.209
- R-Value Work: 0.200
- R-Value Observed: 0.201
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein-tyrosine-phosphatase | 205 | Cryptococcus neoformans var. grubii H99 | Mutation(s): 0 Gene Names: CNAG_01203 EC: 3.1.3.48 |  | |
UniProt | |||||
Find proteins for J9VTB5 (Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)) Explore J9VTB5 Go to UniProtKB: J9VTB5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | J9VTB5 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| VO4 (Subject of Investigation/LOI) Query on VO4 | B [auth A] | VANADATE ION O4 V LSGOVYNHVSXFFJ-UHFFFAOYSA-N |  | ||
| EDO Query on EDO | C [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.209
- R-Value Work: 0.200
- R-Value Observed: 0.201
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.194 | α = 90 |
| b = 66.194 | β = 90 |
| c = 120.324 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2022-06-08 Deposition Author(s): Choi, M.K., Yoo, Y.
Revision History (Full details and data files)
- Version 1.0: 2022-06-08
Type: Initial release - Version 1.1: 2023-11-29
Changes: Data collection, Refinement description
