7EGM | pdb_00007egm

The SRM module of SWI/SNF-nucleosome complex

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history. 

Literature

Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.

He, Z.Y., Chen, K.J., Ye, Y.P., Chen, Z.C.

(2021) Cell Discov 7: 28-28

  • DOI: https://doi.org/10.1038/s41421-021-00262-5
  • Primary Citation Related Structures: 
    7EG6, 7EGM, 7EGP
    • Organizational Affiliation: 
    • Key Laboratory for Protein Sciences of Ministry of Education, School of Life Science, Tsinghua University, Beijing 100084, China.

Macromolecule Content 

  • Total Structure Weight: 704.62 kDa 
  • Atom Count: 19,819 
  • Modeled Residue Count: 2,431 
  • Deposited Residue Count: 6,197 
  • Unique protein chains: 7

Macromolecules

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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Transcription regulatory protein SNF2982Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SNF2, GAM1, RIC1, SWI2, TYE3, YOR290C
EC: 3.6.4
UniProt
Find proteins for P22082 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
SWI/SNF chromatin-remodeling complex subunit SWI11,093Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SWI1, ADR6, GAM3, YPL016W, LPA1
UniProt
Find proteins for P09547 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence
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Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
SWI/SNF chromatin-remodeling complex subunit SNF5918Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SNF5, SWI10, TYE4, YBR289W, YBR2036
UniProt
Find proteins for P18480 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence
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Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
SWI/SNF complex subunit SWI3D,
H [auth E]		836Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SWI3, TYE2, YJL176C, J0495
UniProt
Find proteins for P32591 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence
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Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
Transcription regulatory protein SNF12E [auth H]566Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SNF12, SWP73, YNR023W, N3224
UniProt
Find proteins for P53628 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence
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Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
Transcription regulatory protein SNF6F [auth I]332Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SNF6, YHL025W
UniProt
Find proteins for P18888 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence
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Entity ID: 7
MoleculeChains  Sequence LengthOrganismDetailsImage
SWI/SNF global transcription activator complex subunit SWP82G [auth J]634Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SWP82, YFL049W
UniProt
Find proteins for P43554 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2022-01-12
    Type: Initial release
  • Version 1.1: 2024-06-05
    Changes: Data collection