7E2P | pdb_00007e2p

The Crystal Structure of Mycoplasma bovis enolase

PDB DOI: https://doi.org/10.2210/pdb7E2P/pdb

Classification: LYASE
Organism(s): Mycoplasmopsis bovis
Expression System: Escherichia coli O104:H4 str. 2009EL-2050
Mutation(s): No

Deposited: 2021-02-07 Released: 2022-02-02
Deposition Author(s): Chen, R., Zhang, S., Gan, R., Wang, W., Ran, T., Shao, G., Xiong, Q., Feng, Z.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free:
0.182 (Depositor), 0.182 (DCC)
R-Value Work:
0.158 (Depositor), 0.159 (DCC)
R-Value Observed:
0.159 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

Evidence for the Rapid and Divergent Evolution of Mycoplasmas: Structural and Phylogenetic Analysis of Enolases.

Chen, R., Zhao, L., Gan, R., Feng, Z., Cui, C., Xie, X., Hao, F., Zhang, Z., Wang, L., Ran, T., Wang, W., Zhang, S., Li, Y., Zhang, W., Pang, M., Xiong, Q., Shao, G.

(2022) Front Mol Biosci 8: 811106-811106

DOI: https://doi.org/10.3389/fmolb.2021.811106

Macromolecule Content

Total Structure Weight: 101.02 kDa
Atom Count: 7,242
Modeled Residue Count: 896
Deposited Residue Count: 924
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Enolase	A, B	462	Mycoplasmopsis bovis	Mutation(s): 0 Gene Names: eno, H0I36_02020 EC: 4.2.1.11
UniProt
Find proteins for A0A454AQL1 (Mycoplasmopsis bovis (strain ATCC 25523 / DSM 22781 / NCTC 10131 / PG45)) Explore A0A454AQL1 Go to UniProtKB: A0A454AQL1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A454AQL1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.182 (Depositor), 0.182 (DCC)
R-Value Work: 0.158 (Depositor), 0.159 (DCC)
R-Value Observed: 0.159 (Depositor)

Space Group: I 4

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 142.221	α = 90
b = 142.221	β = 90
c = 107.422	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2022-02-02

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31800160

Revision History (Full details and data files)

Version 1.0: 2022-02-02
Type: Initial release
Version 1.1: 2023-11-29
Changes: Data collection, Refinement description