7DSG | pdb_00007dsg

Crystal structure of Brucella abortus PhiA

PDB DOI: https://doi.org/10.2210/pdb7DSG/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Brucella abortus bv. 1 str. 9-941
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2020-12-31 Released: 2022-01-12
Deposition Author(s): Hyun, Y., Ha, N.-C.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free:
0.261 (Depositor), 0.262 (DCC)
R-Value Work:
0.238 (Depositor), 0.242 (DCC)
R-Value Observed:
0.241 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Brucella abortus PhiA

Hyun, Y., Ha, N.-C.

To be published.

Macromolecule Content

Total Structure Weight: 12.2 kDa
Atom Count: 701
Modeled Residue Count: 88
Deposited Residue Count: 108
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Brucella Abortus PhiA	A	108	Brucella abortus bv. 1 str. 9-941	Mutation(s): 0 Gene Names: BruAb1_0102
UniProt
Find proteins for Q57FR6 (Brucella abortus biovar 1 (strain 9-941)) Explore Q57FR6 Go to UniProtKB: Q57FR6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q57FR6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.90 Å
R-Value Free: 0.261 (Depositor), 0.262 (DCC)
R-Value Work: 0.238 (Depositor), 0.242 (DCC)
R-Value Observed: 0.241 (Depositor)

Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 53.02	α = 90
b = 62.1	β = 90
c = 68.28	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
CrystFEL	data reduction
CrystFEL	data scaling
PHENIX	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2022-01-12

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2022-01-12
Type: Initial release
Version 1.1: 2023-11-29
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.