7DKI

Silk worm FKBP, isoform-1

  • Classification: ISOMERASE
  • Organism(s): Bombyx mori
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2020-11-24 Released: 2022-02-23 
  • Deposition Author(s): Yuchi, Z., Nayak, B.C.
  • Funding Organization(s): National Natural Science Foundation of China (NSFC), Ministry of Science and Technology (MoST, China)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.155 
  • R-Value Observed: 0.159 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Silk worm FKBP, isoform-1

Yuchi, Z.Nayak, B.C.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Peptidylprolyl isomerase
A, B
110Bombyx moriMutation(s): 0 
Gene Names: 732917
EC: 5.2.1.8
UniProt
Find proteins for Q1HQ55 (Bombyx mori)
Explore Q1HQ55 
Go to UniProtKB:  Q1HQ55
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ1HQ55
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.155 
  • R-Value Observed: 0.159 
  • Space Group: P 32
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 52.409α = 90
b = 52.409β = 90
c = 77.109γ = 120
Software Package:
Software NamePurpose
HKL-2000data scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
PHENIXmodel building
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China31972287
Ministry of Science and Technology (MoST, China)China2017YFD0201400, 2017YFD0201403
National Natural Science Foundation of China (NSFC)China2019B2-0017

Revision History  (Full details and data files)

  • Version 1.0: 2022-02-23
    Type: Initial release
  • Version 1.1: 2023-11-29
    Changes: Data collection, Refinement description