7DJS

Crystal structure of isopiperitenol dehydrogenase from Pseudomonas aeruginosa complexed with NAD


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.161 
  • R-Value Observed: 0.162 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Discovery and Engineering of Bacterial (-)-Isopiperitenol Dehydrogenases to Enhance (-)-Menthol Precursor Biosynthesis.

Zhan, J.R.Shou, C.Zheng, Y.C.Chen, Q.Pan, J.Li, C.X.Xu, J.H.

(2021) Adv Synth Catal 363: 3973-3982


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
SDR family oxidoreductase
A, B, C, D
261Pseudomonas aeruginosaMutation(s): 0 
Gene Names: DY930_09865F7O90_18305FDK04_18370IPC116_19850IPC36_02985
UniProt
Find proteins for A0A554HE32 (Pseudomonas aeruginosa)
Explore A0A554HE32 
Go to UniProtKB:  A0A554HE32
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A554HE32
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.161 
  • R-Value Observed: 0.162 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 67.201α = 90
b = 108.582β = 90
c = 124.609γ = 90
Software Package:
Software NamePurpose
HKL-3000data scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
HKL-3000data reduction
HKL-3000phasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2021-09-15
    Type: Initial release
  • Version 1.1: 2023-11-29
    Changes: Data collection, Refinement description