7CP2 | pdb_00007cp2

Crystal structure of the African swine fever virus core shell protein p15

• PDB DOI: https://doi.org/10.2210/pdb7CP2/pdb

• Classification: VIRAL PROTEIN
• Organism(s): African swine fever virus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-08-05 Released: 2020-10-28 
• Deposition Author(s): Liu, K.F., Meng, Y.M., Chai, Y., Li, L.J., Sun, H., Gao, G.F., Tan, S.G., Qi, J.X.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.19 Å
• R-Value Free: 
  0.246 (Depositor), 0.269 (DCC) 
• R-Value Work: 
  0.219 (Depositor) 
• R-Value Observed: 
  0.220 (Depositor) 

Literature

Crystal structure of the African swine fever virus core shell protein p15

Liu, K.F., Meng, Y.M., Chai, Y., Li, L.J., Sun, H., Gao, G.F., Tan, S.G., Qi, J.X.

(2021) Biosaf Health 

• DOI: https://doi.org/10.1016/j.bsheal.2020.09.002

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 51.42 kDa 
• Atom Count: 3,646 
• Modeled Residue Count: 440 
• Deposited Residue Count: 456 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CP530R	A, B, C	152	African swine fever virus	Mutation(s): 0  Gene Names: CP530R, CP530R CDS, ASFV-Georgia_4-118
UniProt
Find proteins for Q65179 (African swine fever virus (strain Badajoz 1971 Vero-adapted)) Explore Q65179  Go to UniProtKB:  Q65179

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.19 Å
• R-Value Free:  0.246 (Depositor), 0.269 (DCC) 
• R-Value Work:  0.219 (Depositor) 
• R-Value Observed: 0.220 (Depositor) 

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 125.037	α = 90
b = 53.601	β = 92.89
c = 74.892	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
CNS	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-10-28 
Deposition Author(s): Liu, K.F., Meng, Y.M., Chai, Y., Li, L.J., Sun, H., Gao, G.F., Tan, S.G., Qi, J.X.

Revision History  

• Version 1.0: 2020-10-28
  Type: Initial release
  
• Version 1.1: 2021-02-03
  Changes: Data collection
• Version 1.2: 2021-05-19
  Changes: Database references
• Version 1.3: 2024-10-23
  Changes: Data collection, Database references, Structure summary