Download MendeleyToxin-antitoxin complex from klebsiella pneumoniae
Kang, S.M.To be published.
7BYE
Toxin-antitoxin complex from klebsiella pneumoniae
- PDB DOI: https://doi.org/10.2210/pdb7BYE/pdb
- Classification: HYDROLASE
- Organism(s): Klebsiella pneumoniae, Klebsiella pneumoniae subsp. pneumoniae MGH 78578
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2020-04-22 Released: 2021-04-28
- Funding Organization(s): National Research Foundation (NRF, Korea)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.232
- R-Value Work: 0.198
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Antitoxin MazE | 32 | Klebsiella pneumoniae | Mutation(s): 0 Gene Names: mazE, SAMEA3531848_05753 |  | |
UniProt | |||||
Find proteins for A6TJ72 (Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)) Explore A6TJ72 Go to UniProtKB: A6TJ72 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A6TJ72 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized protein | 112 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | Mutation(s): 0 Gene Names: KPN_pKPN7p10264 |  | |
UniProt | |||||
Find proteins for A6TJ73 (Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)) Explore A6TJ73 Go to UniProtKB: A6TJ73 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A6TJ73 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | G [auth A], H [auth D] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.232
- R-Value Work: 0.198
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 41.558 | α = 102.06 |
| b = 45.501 | β = 93.6 |
| c = 69.952 | γ = 116.36 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2021-04-28 Deposition Author(s): Kang, S.M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Research Foundation (NRF, Korea) | -- |
Revision History (Full details and data files)
- Version 1.0: 2021-04-28
Type: Initial release - Version 1.1: 2024-03-27
Changes: Data collection, Database references
