7BBS | pdb_00007bbs

Structure of Bg10: an alcohol-tolerant and glucose-stimulated B-glucosidase

PDB DOI: https://doi.org/10.2210/pdb7BBS/pdb

Classification: HYDROLASE
Organism(s): uncultured bacterium
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2020-12-18 Released: 2022-01-12
Deposition Author(s): Maldaner Pereira, P.A., Gomes-Pepe, E.S., Silva, S.T.N., Matias, P.M., Lemos, E.G.M.
Funding Organization(s): Sao Paulo Research Foundation (FAPESP), Foundation for Science and Technology (FCT)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free:
0.270 (Depositor), 0.269 (DCC)
R-Value Work:
0.228 (Depositor), 0.229 (DCC)
R-Value Observed:
0.230 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

Structure of Bg10: an alcohol-tolerant and glucose-stimulated beta-glucosidase

Maldaner Pereira, P.A., Gomes-Pepe, E.S., Silva, S.T.N., Matias, P.M., Lemos, E.G.M.

To be published.

Macromolecule Content

Total Structure Weight: 108.47 kDa
Atom Count: 7,117
Modeled Residue Count: 903
Deposited Residue Count: 986
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Beta-glucosidase Bg10	A, B	493	uncultured bacterium	Mutation(s): 0 EC: 3.2.1.21
UniProt
Find proteins for A0ACD6B8Y8 (uncultured bacterium) Explore A0ACD6B8Y8 Go to UniProtKB: A0ACD6B8Y8
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0ACD6B8Y8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free: 0.270 (Depositor), 0.269 (DCC)
R-Value Work: 0.228 (Depositor), 0.229 (DCC)
R-Value Observed: 0.230 (Depositor)

Diffraction Data:

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 92.432	α = 90
b = 138.485	β = 102.466
c = 114.841	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2022-01-12

Deposition Author(s):

Maldaner Pereira, P.A.

Gomes-Pepe, E.S.

Funding Organization	Location	Grant Number
Sao Paulo Research Foundation (FAPESP)	Brazil	2011/10981-3
Foundation for Science and Technology (FCT)	Portugal	LISBOA-01-0145-FEDER-007660

Revision History (Full details and data files)

Version 1.0: 2022-01-12
Type: Initial release
Version 1.1: 2024-01-31
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.