Structure of echovirus 18 in complex with neonatal Fc receptor
Buchta, D., Levdansky, Y., Fuzik, T., Mukhamedova, L., Moravcova, J., Hrebik, D., Andersen, J.T., Plevka, P.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Echovirus 18 viral protein 3 | A [auth C] | 239 | Echovirus E18 | Mutation(s): 0  EC: 3.4.22.29 (PDB Primary Data), 3.6.1.15 (PDB Primary Data), 3.4.22.28 (PDB Primary Data), 2.7.7.48 (PDB Primary Data) | |
UniProt | |||||
Find proteins for Q8V635 (Echovirus E18) Explore Q8V635  Go to UniProtKB:  Q8V635 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8V635 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Echovirus 18 viral protein 4 | B [auth D] | 69 | Echovirus E18 | Mutation(s): 0  EC: 3.4.22.29 (PDB Primary Data), 3.6.1.15 (PDB Primary Data), 3.4.22.28 (PDB Primary Data), 2.7.7.48 (PDB Primary Data) | |
UniProt | |||||
Find proteins for Q8V635 (Echovirus E18) Explore Q8V635  Go to UniProtKB:  Q8V635 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8V635 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Echovirus 18 viral protein 1 | C [auth A] | 287 | Echovirus E18 | Mutation(s): 0  EC: 3.4.22.29 (PDB Primary Data), 3.6.1.15 (PDB Primary Data), 3.4.22.28 (PDB Primary Data), 2.7.7.48 (PDB Primary Data) | |
UniProt | |||||
Find proteins for Q8V635 (Echovirus E18) Explore Q8V635  Go to UniProtKB:  Q8V635 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8V635 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Echovirus 18 viral protein 2 | D [auth B] | 260 | Echovirus E18 | Mutation(s): 0  EC: 3.4.22.29 (PDB Primary Data), 3.6.1.15 (PDB Primary Data), 3.4.22.28 (PDB Primary Data), 2.7.7.48 (PDB Primary Data) | |
UniProt | |||||
Find proteins for Q8V635 (Echovirus E18) Explore Q8V635  Go to UniProtKB:  Q8V635 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8V635 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
IgG receptor FcRn large subunit p51 | E [auth G] | 267 | Homo sapiens | Mutation(s): 0  Gene Names: FCGRT, FCRN | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P55899 (Homo sapiens) Explore P55899  Go to UniProtKB:  P55899 | |||||
PHAROS:  P55899 GTEx:  ENSG00000104870  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P55899 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | F [auth H] | 99 | Homo sapiens | Mutation(s): 0  Gene Names: B2M, CDABP0092, HDCMA22P | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61769 (Homo sapiens) Explore P61769  Go to UniProtKB:  P61769 | |||||
PHAROS:  P61769 GTEx:  ENSG00000166710  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61769 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PLM (Subject of Investigation/LOI) Query on PLM | G [auth A] | PALMITIC ACID C16 H32 O2 IPCSVZSSVZVIGE-UHFFFAOYSA-N | |||
GUN Query on GUN | H [auth B] | GUANINE C5 H5 N5 O UYTPUPDQBNUYGX-UHFFFAOYSA-N |
Task | Software Package | Version |
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RECONSTRUCTION | RELION | 3 |
Funding Organization | Location | Grant Number |
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Grant Agency of the Czech Republic | Czech Republic | GX19-25982X |