Download MendeleyCrystal structure of rsEGFP2 in its fluorescent on-state at pH 8.0
Moreno-Chicano, T., Schlichting, I., Hartmann, E., Zala, N., Colletier, J.-P., Weik, M.To be published.
7AMU
Crystal structure of rsEGFP2 T204A in its fluorescent on-state
- PDB DOI: https://doi.org/10.2210/pdb7AMU/pdb
- Classification: FLUORESCENT PROTEIN
- Organism(s): Aequorea victoria
- Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
- Mutation(s): Yes
- Deposited: 2020-10-09 Released: 2022-04-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.64 Å
- R-Value Free: 0.226
- R-Value Work: 0.169
- R-Value Observed: 0.172
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Green fluorescent protein | 250 | Aequorea victoria | Mutation(s): 7 Gene Names: GFP |  | |
UniProt | |||||
Find proteins for P42212 (Aequorea victoria) Explore P42212 Go to UniProtKB: P42212 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P42212 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | H [auth A], I [auth A], J [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| PIA Query on PIA | A | L-PEPTIDE LINKING | C14 H15 N3 O4 |  | ALA, TYR, GLY |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.64 Å
- R-Value Free: 0.226
- R-Value Work: 0.169
- R-Value Observed: 0.172
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 51.269 | α = 90 |
| b = 61.809 | β = 90 |
| c = 70.846 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| Aimless | data scaling |
| REFMAC | phasing |
Entry History
Deposition Data
- Released Date: 2022-04-20 Deposition Author(s): Moreno-Chicano, T., Schlichting, I., Hartmann, E., Zala, N., Colletier, J.-P., Weik, M.
Revision History (Full details and data files)
- Version 1.0: 2022-04-20
Type: Initial release - Version 1.1: 2024-01-31
Changes: Data collection, Database references, Derived calculations, Refinement description, Source and taxonomy
