7AAF | pdb_00007aaf

Structural evolution of the tissue-specific U2AF2 paralog and alternative splicing factor LS2

PDB DOI: https://doi.org/10.2210/pdb7AAF/pdb
BMRB: 34555

Classification: RNA BINDING PROTEIN
Organism(s): Drosophila melanogaster
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2020-09-04 Released: 2021-10-06
Deposition Author(s): Kawale, A.A., Kang, H.S., Sattler, M.
Funding Organization(s): German Research Foundation (DFG)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 40
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 7AAF

This is version 1.2 of the entry. See complete history.

Literature

Structural evolution of the tissue-specific U2AF2 paralog and alternative splicing factor LS2

Kawale, A.A., Kang, H.S., Sattler, M.

To be published.

Macromolecule Content

Total Structure Weight: 8.91 kDa
Atom Count: 623
Modeled Residue Count: 81
Deposited Residue Count: 81
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
U2 snRNP auxiliary factor large subunit	A	81	Drosophila melanogaster	Mutation(s): 0 Gene Names: LS2, cg3162, Dmel\CG3162, Dmel_CG3162
UniProt
Find proteins for Q9W1T4 (Drosophila melanogaster) Explore Q9W1T4 Go to UniProtKB: Q9W1T4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9W1T4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 40
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2021-10-06

Deposition Author(s):

Funding Organization	Location	Grant Number
German Research Foundation (DFG)	Germany	--

Revision History (Full details and data files)

Version 1.0: 2021-10-06
Type: Initial release
Version 1.1: 2023-06-14
Changes: Other
Version 1.2: 2024-06-19
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.