Structure of the BRD9 bromodomain
Diaz-Saez, L., Krojer, T., Picaud, S., von Delft, F., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., Huber, K.V.M.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Bromodomain-containing protein 9 | 121 | Homo sapiens | Mutation(s): 0  Gene Names: BRD9, UNQ3040/PRO9856 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9H8M2 (Homo sapiens) Explore Q9H8M2  Go to UniProtKB:  Q9H8M2 | |||||
PHAROS:  Q9H8M2 GTEx:  ENSG00000028310  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9H8M2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
OEZ (Subject of Investigation/LOI) Query on OEZ | B [auth A] | ~{N}-cyclobutyl-3-(6-ethanoylpyrrolo[1,2-a]pyrimidin-8-yl)-4-methoxy-benzamide C21 H21 N3 O3 ZVDRWJICVNPHJL-UHFFFAOYSA-N | |||
EDO Query on EDO | C [auth A], D [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
NA Query on NA | E [auth A], F [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 108.888 | α = 90 |
b = 41.67 | β = 102.58 |
c = 30.19 | γ = 90 |
Software Name | Purpose |
---|---|
Aimless | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
iMOSFLM | data reduction |
Funding Organization | Location | Grant Number |
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Innovative Medicines Initiative | -- |