Download MendeleyRhs1-CT in complex with cognate immunity protein RhsI1
Hagan, M., Coulthurst, S.To be published.
6XTD
Rhs1-CT in complex with cognate immunity protein RhsI1
- PDB DOI: https://doi.org/10.2210/pdb6XTD/pdb
- Classification: ANTIMICROBIAL PROTEIN
- Organism(s): Serratia marcescens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2020-01-16 Released: 2021-07-28
- Funding Organization(s): Medical Research Council (MRC, United Kingdom)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free: 0.165
- R-Value Work: 0.121
wwPDB Validation 3D Report Full Report
This is version 2.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative deoxyribonuclease RhsA | 155 | Serratia marcescens | Mutation(s): 0 Gene Names: rhsA_2, PWN146_02504 EC: 3.1 |  | |
UniProt | |||||
Find proteins for A0A1C3HFI3 (Serratia marcescens) Explore A0A1C3HFI3 Go to UniProtKB: A0A1C3HFI3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A1C3HFI3 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Secreted protein | 163 | Serratia marcescens | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| BTB Query on BTB | E [auth A] | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C8 H19 N O5 OWMVSZAMULFTJU-UHFFFAOYSA-N |  | ||
| BR Query on BR | C [auth A] D [auth A] F [auth B] G [auth B] H [auth B] | BROMIDE ION Br CPELXLSAUQHCOX-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.30 Å
- R-Value Free: 0.165
- R-Value Work: 0.121
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 39.655 | α = 101.202 |
| b = 44.108 | β = 96.126 |
| c = 46.807 | γ = 114.149 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| xia2 | data reduction |
| Aimless | data scaling |
| CRANK2 | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2021-07-28 Deposition Author(s): Hagan, M.R., Hunter, B., Coulthurst, S.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Medical Research Council (MRC, United Kingdom) | -- |
Revision History (Full details and data files)
- Version 1.0: 2021-07-28
Type: Initial release - Version 2.0: 2023-02-08
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Other, Polymer sequence, Source and taxonomy, Structure summary - Version 2.1: 2024-06-19
Changes: Data collection
