Engineering Specific Protein-Protein Interactions Through Halogen and Hydrogen Bonds
Rowe Hartje, R.K., Ferrero, M., Cavallo, G., Metrangolo, P., Ho, A., Czarny, R., Ho, P.S.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
GCN4-p1 peptide with TFI-F16 | 30 | Saccharomyces cerevisiae | Mutation(s): 1 | ![]() | |
UniProt | |||||
Find proteins for P03069 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P03069 Go to UniProtKB: P03069 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03069 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
GCN4-p1 peptide with A16 | 30 | Saccharomyces cerevisiae | Mutation(s): 1 | ![]() | |
UniProt | |||||
Find proteins for P03069 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P03069 Go to UniProtKB: P03069 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03069 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NA Query on NA | D [auth A], E [auth B], F [auth B], G [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
V61 Query on V61 | A | L-PEPTIDE LINKING | C9 H6 F4 I N O2 | PHE |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 59.65 | α = 90 |
b = 35.19 | β = 100.647 |
c = 47.02 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Science Foundation (NSF, United States) | United States | 1608146 |
National Science Foundation (NSF, United States) | United States | 1905328 |