Crystal Structure of 2-hydroxyacyl CoA lyase (HACL) from Rhodospirillales bacterium URHD0017
Chou, A., Miller, M.D., Olmos Jr., J.L., Xu, W., Clomburg, J.M., Gonzalez, R., Philips Jr., G.N.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
2-hydroxyacyl-CoA lyase 1 | 552 | Rhodospirillales bacterium URHD0017 | Mutation(s): 0  Gene Names: SAMN02990966_07839 | ||
UniProt | |||||
Find proteins for A0A1H8YFL8 (Rhodospirillales bacterium URHD0017) Explore A0A1H8YFL8  Go to UniProtKB:  A0A1H8YFL8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A1H8YFL8 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TZD (Subject of Investigation/LOI) Query on TZD | D [auth A], H [auth B] | 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN
DIPHOSPHATE C12 H18 N4 O8 P2 S ZGJUYGIRPQSCFA-UHFFFAOYSA-N | |||
ADP (Subject of Investigation/LOI) Query on ADP | E [auth A], I [auth B] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | C [auth A], G [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
UNL Query on UNL | F [auth A], J [auth B] | Unknown ligand JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 103.94 | α = 90 |
b = 64.431 | β = 90.88 |
c = 182.693 | γ = 90 |
Software Name | Purpose |
---|---|
PDB_EXTRACT | data extraction |
PHENIX | refinement |
ARP/wARP | model building |
PHASER | phasing |
Aimless | data scaling |
DIALS | data reduction |
xia2 | data reduction |
JBluIce-EPICS | data collection |
Funding Organization | Location | Grant Number |
---|---|---|
National Science Foundation (NSF, United States) | United States | STC 1231306 |
National Science Foundation (NSF, United States) | United States | CBET-1605999 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01 GM115261 |
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | R01 CA217255 |
National Science Foundation (NSF, United States) | United States | GRFP 1450681 |