Crystal structure of Ribokinase from Cryptococcus neoformans var. grubii serotype A in complex with ADP
Abendroth, J., Davies, D.R., Lorimer, D.D., Horanyi, P.S., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ribokinase | 332 | Cryptococcus neoformans var. grubii H99 | Mutation(s): 0  Gene Names: CNAG_02296 EC: 2.7.1.15 | ||
UniProt | |||||
Find proteins for J9VQ51 (Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)) Explore J9VQ51  Go to UniProtKB:  J9VQ51 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | J9VQ51 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ADP (Subject of Investigation/LOI) Query on ADP | E [auth A], H [auth B], K [auth C], M [auth D] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
EDO Query on EDO | F [auth A], I [auth B], L [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
NA Query on NA | G [auth A], J [auth B], N [auth D] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 77.17 | α = 90 |
b = 84.57 | β = 95.27 |
c = 98.27 | γ = 90 |
Software Name | Purpose |
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XDS | data reduction |
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
PHASER | phasing |