6VG3

Structure of unliganded, inactive PTK7 kinase domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.189 
  • R-Value Observed: 0.192 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report

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This is version 1.1 of the entry. See complete history


Literature

Structural insights into receptor tyrosine kinase pseudokinase function

Sheetz, J.B.Mathea, S.Karvonen, H.Malhotra, K.Chaterjee, D.Perttila, R.Niininen, W.Stayrook, S.E.Radhakrishnan, R.Ungureanu, D.Knapp, S.Lemmon, M.A.

(2020) Mol Cell 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Inactive tyrosine-protein kinase 7
A, B, C
296Homo sapiensMutation(s): 0 
Gene Names: PTK7CCK4
UniProt & NIH Common Fund Data Resources
Find proteins for Q13308 (Homo sapiens)
Explore Q13308 
Go to UniProtKB:  Q13308
PHAROS:  Q13308
GTEx:  ENSG00000112655 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ13308
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.189 
  • R-Value Observed: 0.192 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 95.628α = 90
b = 119.918β = 90
c = 166.516γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
SCALAdata scaling
PHASERphasing
BUSTERrefinement
PDB_EXTRACTdata extraction

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR35GM122485

Revision History  (Full details and data files)

  • Version 1.0: 2020-05-27
    Type: Initial release
  • Version 1.1: 2023-10-11
    Changes: Data collection, Database references, Refinement description