Haptoglobin is an inhibitor of Staphylococcus aureus IsdH-mediated heme-sequestering
Mikkelsen, J.H., Runager, K.S., Andersen, C.B.F.To be published.
Experimental Data Snapshot
Starting Models: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemoglobin subunit alpha | 141 | Homo sapiens | Mutation(s): 0  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P69905 (Homo sapiens) Explore P69905  Go to UniProtKB:  P69905 | |||||
PHAROS:  P69905 GTEx:  ENSG00000188536  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P69905 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemoglobin subunit beta | 146 | Homo sapiens | Mutation(s): 0  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P68871 (Homo sapiens) Explore P68871  Go to UniProtKB:  P68871 | |||||
PHAROS:  P68871 GTEx:  ENSG00000244734  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68871 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Haptoglobin | 267 | Homo sapiens | Mutation(s): 0  Gene Names: HP | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P00738 (Homo sapiens) Explore P00738  Go to UniProtKB:  P00738 | |||||
PHAROS:  P00738 GTEx:  ENSG00000257017  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00738 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cell wall surface anchor family protein | 354 | Staphylococcus aureus | Mutation(s): 0  Gene Names: isdH, EP54_00915, EQ90_06455, HMPREF3211_02292, NCTC10654_01789 | ||
UniProt | |||||
Find proteins for Q2FXJ2 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FXJ2  Go to UniProtKB:  Q2FXJ2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FXJ2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEM (Subject of Investigation/LOI) Query on HEM | F [auth A], G [auth B] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 84.1 | α = 90 |
b = 86.77 | β = 90 |
c = 217.95 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Lundbeckfonden | Denmark | R191-2015-733 |