Structure of the human RAB38 in complex with GTP
Diaz-Saez, L., a Jung, S., Huber, K., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ras-related protein Rab-38 | 208 | Homo sapiens | Mutation(s): 0  Gene Names: RAB38 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P57729 (Homo sapiens) Explore P57729  Go to UniProtKB:  P57729 | |||||
PHAROS:  P57729 GTEx:  ENSG00000123892  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P57729 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GTP (Subject of Investigation/LOI) Query on GTP | B [auth A] | GUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O14 P3 XKMLYUALXHKNFT-UUOKFMHZSA-N | |||
BR Query on BR | M [auth A], N [auth A], O [auth A] | BROMIDE ION Br CPELXLSAUQHCOX-UHFFFAOYSA-M | |||
EDO Query on EDO | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | L [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 35.804 | α = 90 |
b = 144.174 | β = 90 |
c = 77.523 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
DIALS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Innovative Medicines Initiative | United Kingdom | -- |