Structure of the human RAB39B in complex with GMPPNP
Diaz-Saez, L., Jung, S., Huber, K., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ras-related protein Rab-39B | 208 | Homo sapiens | Mutation(s): 0  Gene Names: RAB39B | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q96DA2 (Homo sapiens) Explore Q96DA2  Go to UniProtKB:  Q96DA2 | |||||
PHAROS:  Q96DA2 GTEx:  ENSG00000155961  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q96DA2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GNP (Subject of Investigation/LOI) Query on GNP | C [auth A] | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER C10 H17 N6 O13 P3 UQABYHGXWYXDTK-UUOKFMHZSA-N | |||
GLY Query on GLY | B [auth A] | GLYCINE C2 H5 N O2 DHMQDGOQFOQNFH-UHFFFAOYSA-N | |||
EDO Query on EDO | D [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | E [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 52.725 | α = 90 |
b = 35.285 | β = 107.51 |
c = 53.605 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
DIALS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Innovative Medicines Initiative | United Kingdom | -- |