6QMV

E87D sulfur oxygenase reductase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.159 
  • R-Value Observed: 0.160 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Multiple sulfane modifications in active-site cysteine thiols of two sulfur oxygenase reductases and analysis of substrate/product channels

Frazao, C.Klezin, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Sulfur oxygenase/reductase
A, B, C, D, E
A, B, C, D, E, F
318Acidianus ambivalensMutation(s): 1 
Gene Names: sor
EC: 1.13.11.55
UniProt
Find proteins for P29082 (Acidianus ambivalens)
Explore P29082 
Go to UniProtKB:  P29082
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP29082
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  2 Unique
IDChains TypeFormula2D DiagramParent
CSS
Query on CSS
A, B, C, D, E
A, B, C, D, E, F
L-PEPTIDE LINKINGC3 H7 N O2 S2CYS
TSY
Query on TSY
A, B, C, D, E
A, B, C, D, E, F
L-PEPTIDE LINKINGC3 H7 N O2 S3CYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.193 
  • R-Value Work: 0.159 
  • R-Value Observed: 0.160 
  • Space Group: I 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 161.92α = 90
b = 161.92β = 90
c = 154.25γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XDSdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research FoundationGermanyKl885-6/1
Fundacao para a Ciencia e a TecnologiaPortugalLIOA-01-0145-FEDER-007660

Revision History  (Full details and data files)

  • Version 1.0: 2020-03-04
    Type: Initial release
  • Version 1.1: 2024-01-24
    Changes: Data collection, Database references, Derived calculations, Refinement description