6PWC

A complex structure of arrestin-2 bound to neurotensin receptor 1


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

A complex structure of arrestin-2 bound to a G protein-coupled receptor.

Yin, W.Li, Z.Jin, M.Yin, Y.L.de Waal, P.W.Pal, K.Yin, Y.Gao, X.He, Y.Gao, J.Wang, X.Zhang, Y.Zhou, H.Melcher, K.Jiang, Y.Cong, Y.Edward Zhou, X.Yu, X.Eric Xu, H.

(2019) Cell Res 29: 971-983

  • DOI: https://doi.org/10.1038/s41422-019-0256-2
  • Primary Citation of Related Structures:  
    6PWC

  • PubMed Abstract: 

    Arrestins comprise a family of signal regulators of G-protein-coupled receptors (GPCRs), which include arrestins 1 to 4. While arrestins 1 and 4 are visual arrestins dedicated to rhodopsin, arrestins 2 and 3 (Arr2 and Arr3) are β-arrestins known to regulate many nonvisual GPCRs. The dynamic and promiscuous coupling of Arr2 to nonvisual GPCRs has posed technical challenges to tackle the basis of arrestin binding to GPCRs. Here we report the structure of Arr2 in complex with neurotensin receptor 1 (NTSR1), which reveals an overall assembly that is strikingly different from the visual arrestin-rhodopsin complex by a 90° rotation of Arr2 relative to the receptor. In this new configuration, intracellular loop 3 (ICL3) and transmembrane helix 6 (TM6) of the receptor are oriented toward the N-terminal domain of the arrestin, making it possible for GPCRs that lack the C-terminal tail to couple Arr2 through their ICL3. Molecular dynamics simulation and crosslinking data further support the assembly of the Arr2‒NTSR1 complex. Sequence analysis and homology modeling suggest that the Arr2‒NTSR1 complex structure may provide an alternative template for modeling arrestin-GPCR interactions.


  • Organizational Affiliation

    The CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Neurotensin receptor type 1A [auth R]370Homo sapiensMutation(s): 0 
Gene Names: NTSR1NTRR
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P30989 (Homo sapiens)
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Go to UniProtKB:  P30989
PHAROS:  P30989
GTEx:  ENSG00000101188 
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UniProt GroupP30989
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  • Reference Sequence

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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Neurotensin peptide6synthetic constructMutation(s): 0 
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Beta-arrestin-1C [auth A]393Homo sapiensMutation(s): 0 
Gene Names: ARRB1ARR1
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P49407 (Homo sapiens)
Explore P49407 
Go to UniProtKB:  P49407
PHAROS:  P49407
GTEx:  ENSG00000137486 
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UniProt GroupP49407
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Fab30 heavy chainD [auth H]238synthetic constructMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Fab30 light chainE [auth L]215synthetic constructMutation(s): 0 
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM127710
Ministry of Science and Technology (MoST, China)ChinaXDB08020303

Revision History  (Full details and data files)

  • Version 1.0: 2019-12-04
    Type: Initial release
  • Version 1.1: 2019-12-18
    Changes: Database references
  • Version 1.2: 2020-01-08
    Changes: Author supporting evidence
  • Version 1.3: 2024-10-30
    Changes: Data collection, Database references, Structure summary