6PK9 | pdb_00006pk9

Solution Structure of lncRNA (LINK-A) 20-nt Hexaloop Hairpin

• PDB DOI: https://doi.org/10.2210/pdb6PK9/pdb
• NAKB: 6PK9
• BMRB: 30622

• Classification: REPLICATION
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2019-06-28 Released: 2020-07-01 
• Deposition Author(s): Amado, A.Y., Walker, M., Varani, G.
• Funding Organization(s): National Institutes of Health/National Center for Research Resources (NIH/NCRR)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Literature

Structure of the lncRNA LINK-A Hexaloop Hairpin in PI(3,4,5)P3 Interaction

Amado, A.Y., Walker, M., Varani, G.

To be published.

Biological Assembly 1  

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 6.41 kDa 
• Atom Count: 424 
• Modeled Residue Count: 20 
• Deposited Residue Count: 20 
• Unique nucleic acid chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Length	Organism	Image
RNA (5'-R(*GP*GP*AP*GP*GP*GP*UP*AP*GP*AP*CP*UP*CP*GP*CP*UP*CP*UP*CP*C)-3')	A	20	Homo sapiens

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 10 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2020-07-01 
Deposition Author(s): Amado, A.Y., Walker, M., Varani, G.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Center for Research Resources (NIH/NCRR)	United States	62-8160

Revision History  

• Version 1.0: 2020-07-01
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Database references, Other
• Version 1.2: 2024-05-15
  Changes: Data collection, Database references