6NU2

Structural insights into unique features of the human mitochondrial ribosome recycling

  • Classification: RIBOSOME
  • Organism(s): Homo sapiens
  • Mutation(s): No 

  • Deposited: 2019-01-30 Released: 2019-04-17 
  • Deposition Author(s): Sharma, M.R., Koripella, R.K., Agrawal, R.K.
  • Funding Organization(s): National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human Development (NIH/NICHD), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Structural insights into unique features of the human mitochondrial ribosome recycling.

Koripella, R.K.Sharma, M.R.Risteff, P.Keshavan, P.Agrawal, R.K.

(2019) Proc Natl Acad Sci U S A 116: 8283-8288

  • DOI: https://doi.org/10.1073/pnas.1815675116
  • Primary Citation of Related Structures:  
    6NU2, 6NU3

  • PubMed Abstract: 

    Mammalian mitochondrial ribosomes (mitoribosomes) are responsible for synthesizing proteins that are essential for oxidative phosphorylation (ATP generation). Despite their common ancestry with bacteria, the composition and structure of the human mitoribosome and its translational factors are significantly different from those of their bacterial counterparts. The mammalian mitoribosome recycling factor (RRF mt ) carries a mito-specific N terminus extension (NTE), which is necessary for the function of RRF mt Here we present a 3.9-Å resolution cryo-electron microscopic (cryo-EM) structure of the human 55S mitoribosome-RRF mt complex, which reveals α-helix and loop structures for the NTE that makes multiple mito-specific interactions with functionally critical regions of the mitoribosome. These include ribosomal RNA segments that constitute the peptidyl transferase center (PTC) and those that connect PTC with the GTPase-associated center and with mitoribosomal proteins L16 and L27. Our structure reveals the presence of a tRNA in the pe/E position and a rotation of the small mitoribosomal subunit on RRF mt binding. In addition, we observe an interaction between the pe/E tRNA and a mito-specific protein, mL64. These findings help understand the unique features of mitoribosome recycling.


  • Organizational Affiliation

    Division of Translational Medicine, Wadsworth Center, New York State Department of Health, Albany, NY 12201-0509.


Macromolecules

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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L2, mitochondrialC [auth D]236Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000112651 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L3, mitochondrialD [auth E]304Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000114686 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L4, mitochondrialE [auth F]250Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000105364 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L9, mitochondrialF [auth H]95Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000143436 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L10, mitochondrialG [auth I]168Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000159111 
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L11, mitochondrialH [auth J]140Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000174547 
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L13, mitochondrialI [auth K]177Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000172172 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L14, mitochondrialJ [auth L]115Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000180992 
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L15, mitochondrialK [auth M]287Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000137547 
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L16, mitochondrialL [auth N]205Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000166902 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L17, mitochondrialM [auth O]152Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000158042 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L18, mitochondrialN [auth P]138Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000112110 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L19, mitochondrialO [auth Q]219Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000115364 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L20, mitochondrialP [auth R]140Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000242485 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L21, mitochondrialQ [auth S]156Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000197345 
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L22, mitochondrialR [auth T]166Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000082515 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L23, mitochondrialS [auth U]111Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000214026 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L24, mitochondrialT [auth V]202Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000143314 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L27, mitochondrialU [auth W]115Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000108826 
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L28, mitochondrialV [auth X]243Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000086504 
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L47, mitochondrialW [auth Y]176Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000136522 
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L30, mitochondrialX [auth Z]120Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000185414 
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L32, mitochondrialY [auth 0]108Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000106591 
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L33, mitochondrialZ [auth 1]52Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000243147 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L34, mitochondrialAA [auth 2]46Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000130312 
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L35, mitochondrialBA [auth 3]95Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000132313 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L36, mitochondrialCA [auth 4]36Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000171421 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L37, mitochondrialDA [auth 5]392Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000116221 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L38, mitochondrialEA [auth 6]354Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000204316 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L39, mitochondrialFA [auth 7]287Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000154719 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L40, mitochondrialGA [auth 8]99Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000185608 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L41, mitochondrialHA [auth 9]123Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000182154 
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L42, mitochondrialIA [auth a]108Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000198015 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L43, mitochondrialJA [auth b]148Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000055950 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L44, mitochondrialKA [auth c]286Homo sapiensMutation(s): 0 
EC: 3.1.26
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GTEx:  ENSG00000135900 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L45, mitochondrialLA [auth d]171Homo sapiensMutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L46, mitochondrialMA [auth e]237Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000259494 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L48, mitochondrialNA [auth f]146Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000175581 
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UniProt GroupQ96GC5
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L49, mitochondrialOA [auth g]129Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000149792 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L50, mitochondrialPA [auth h]103Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000136897 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L51, mitochondrialQA [auth i]97Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000111639 
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L52, mitochondrialRA [auth j]85Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000172590 
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L53, mitochondrialSA [auth k]84Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000204822 
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L54, mitochondrialTA [auth l]23Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000183617 
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L55, mitochondrialUA [auth m]45Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000162910 
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein 63, mitochondrialVA [auth o]94Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000173141 
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
Peptidyl-tRNA hydrolase ICT1, mitochondrialWA [auth p]156Homo sapiensMutation(s): 0 
EC: 3.1.1.29
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GTEx:  ENSG00000167862 
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
Growth arrest and DNA damage-inducible proteins-interacting protein 1XA [auth q]128Homo sapiensMutation(s): 0 
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Find proteins for Q8TAE8 (Homo sapiens)
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GTEx:  ENSG00000179271 
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein S18a, mitochondrialYA [auth r]162Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000096080 
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein S30, mitochondrialZA [auth s]390Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000112996 
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Unknown protein/protein extensionAB [auth t]28Homo sapiensMutation(s): 0 
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosome-recycling factor, mitochondrialCB [auth z]204Homo sapiensMutation(s): 0 
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Find proteins for Q96E11 (Homo sapiens)
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GTEx:  ENSG00000148187 
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S2, mitochondrialEB [auth AB]217Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000122140 
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S24, mitochondrialFB [auth AC]132Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000062582 
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S5, mitochondrialGB [auth AD]343Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000144029 
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S6, mitochondrialHB [auth AE]122Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000243927 
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S7, mitochondrialIB [auth AF]208Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000125445 
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S9, mitochondrialJB [auth AG]326Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000135972 
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S10, mitochondrialKB [auth AH]122Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000048544 
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S11, mitochondrialLB [auth AI]136Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000181991 
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S12, mitochondrialMB [auth AJ]108Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000128626 
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S14, mitochondrialNB [auth AK]101Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000120333 
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S15, mitochondrialOB [auth AL]164Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000116898 
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S16, mitochondrialPB [auth AM]116Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000182180 
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S17, mitochondrialQB [auth AN]107Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000239789 
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S18b, mitochondrialRB [auth AO]185Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000204568 
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S18c, mitochondrialSB [auth AP]96Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000163319 
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S21, mitochondrialTB [auth AQ]86Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000266472 
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S22, mitochondrialUB [auth AR]242Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000175110 
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S23, mitochondrialVB [auth AS]126Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000181610 
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S25, mitochondrialWB [auth AT]162Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000131368 
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S26, mitochondrialXB [auth AU]173Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000125901 
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S27, mitochondrialYB [auth AV]365Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000113048 
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S28, mitochondrialZB [auth AW]97Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000147586 
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S29, mitochondrialAC [auth AX]348Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000132676 
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Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S31, mitochondrialBC [auth AY]108Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000102738 
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Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S33, mitochondrialCC [auth AZ]87Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000090263 
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Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S34, mitochondrialDC [auth A0]208Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000074071 
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Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S35, mitochondrialEC [auth A1]272Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000061794 
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Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1FC [auth A2]116Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000172586 
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UniProt GroupQ96BP2
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Entity ID: 85
MoleculeChains Sequence LengthOrganismDetailsImage
Aurora kinase A-interacting proteinGC [auth A3]69Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NWT8 (Homo sapiens)
Explore Q9NWT8 
Go to UniProtKB:  Q9NWT8
PHAROS:  Q9NWT8
GTEx:  ENSG00000175756 
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UniProt GroupQ9NWT8
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Entity ID: 86
MoleculeChains Sequence LengthOrganismDetailsImage
Pentatricopeptide repeat domain-containing protein 3, mitochondrialHC [auth A4]474Homo sapiensMutation(s): 0 
UniProt & NIH Common Fund Data Resources
Find proteins for Q96EY7 (Homo sapiens)
Explore Q96EY7 
Go to UniProtKB:  Q96EY7
PHAROS:  Q96EY7
GTEx:  ENSG00000132300 
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UniProt GroupQ96EY7
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Entity ID: 1
MoleculeChains LengthOrganismImage
16S rRNA1,472Homo sapiens
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Entity ID: 2
MoleculeChains LengthOrganismImage
mt-tRNAVal56Homo sapiens
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Entity ID: 54
MoleculeChains LengthOrganismImage
E-site tRNABB [auth u]2Homo sapiens
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Entity ID: 56
MoleculeChains LengthOrganismImage
12S rRNADB [auth AA]923Homo sapiens
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Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download Ideal Coordinates CCD File 
CG [auth 0]
DG [auth 4]
FG [auth r]
IH [auth AB]
JH [auth AO]
CG [auth 0],
DG [auth 4],
FG [auth r],
IH [auth AB],
JH [auth AO],
KH [auth AP],
LH [auth AT]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

Download Ideal Coordinates CCD File 
AD [auth A]
AE [auth A]
AF [auth A]
AG [auth A]
AH [auth AA]
AD [auth A],
AE [auth A],
AF [auth A],
AG [auth A],
AH [auth AA],
BD [auth A],
BE [auth A],
BF [auth A],
BG [auth M],
BH [auth AA],
CD [auth A],
CE [auth A],
CF [auth A],
CH [auth AA],
DD [auth A],
DE [auth A],
DF [auth A],
DH [auth AA],
ED [auth A],
EE [auth A],
EF [auth A],
EG [auth g],
EH [auth AA],
FD [auth A],
FE [auth A],
FF [auth A],
FH [auth AA],
GD [auth A],
GE [auth A],
GF [auth A],
GG [auth AA],
GH [auth AA],
HD [auth A],
HE [auth A],
HF [auth A],
HG [auth AA],
HH [auth AA],
IC [auth A],
ID [auth A],
IE [auth A],
IF [auth A],
IG [auth AA],
JC [auth A],
JD [auth A],
JE [auth A],
JF [auth A],
JG [auth AA],
KC [auth A],
KD [auth A],
KE [auth A],
KF [auth A],
KG [auth AA],
LC [auth A],
LD [auth A],
LE [auth A],
LF [auth A],
LG [auth AA],
MC [auth A],
MD [auth A],
ME [auth A],
MF [auth A],
MG [auth AA],
NC [auth A],
ND [auth A],
NE [auth A],
NF [auth A],
NG [auth AA],
OC [auth A],
OD [auth A],
OE [auth A],
OF [auth A],
OG [auth AA],
PC [auth A],
PD [auth A],
PE [auth A],
PF [auth A],
PG [auth AA],
QC [auth A],
QD [auth A],
QE [auth A],
QF [auth A],
QG [auth AA],
RC [auth A],
RD [auth A],
RE [auth A],
RF [auth A],
RG [auth AA],
SC [auth A],
SD [auth A],
SE [auth A],
SF [auth A],
SG [auth AA],
TC [auth A],
TD [auth A],
TE [auth A],
TF [auth A],
TG [auth AA],
UC [auth A],
UD [auth A],
UE [auth A],
UF [auth A],
UG [auth AA],
VC [auth A],
VD [auth A],
VE [auth A],
VF [auth A],
VG [auth AA],
WC [auth A],
WD [auth A],
WE [auth A],
WF [auth A],
WG [auth AA],
XC [auth A],
XD [auth A],
XE [auth A],
XF [auth A],
XG [auth AA],
YC [auth A],
YD [auth A],
YE [auth A],
YF [auth A],
YG [auth AA],
ZC [auth A],
ZD [auth A],
ZE [auth A],
ZF [auth A],
ZG [auth AA]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
RECONSTRUCTIONcryoSPARC

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human Development (NIH/NICHD)United StatesR01 GM61576
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01 GM 32734

Revision History  (Full details and data files)

  • Version 1.0: 2019-04-17
    Type: Initial release
  • Version 1.1: 2019-04-24
    Changes: Data collection, Database references
  • Version 1.2: 2019-05-08
    Changes: Data collection, Database references
  • Version 1.3: 2019-12-11
    Changes: Author supporting evidence