Refined model of chicken vinculin suggests the mechanism of activation by helical super-bundle unfurling
Stec, D.L., Stec, B.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Vinculin | 1,086 | Gallus gallus | Mutation(s): 0  Gene Names: VCL, VINC1 | ||
UniProt | |||||
Find proteins for P12003 (Gallus gallus) Explore P12003  Go to UniProtKB:  P12003 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P12003 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
KYG Query on KYG | D [auth A] | (1R,2R,3S,4R,5R,6S)-4-{[(S)-[(2S)-2,3-dihydroxypropoxy](hydroxy)phosphoryl]oxy}-3,5,6-trihydroxycyclohexane-1,2-diyl bis[dihydrogen (phosphate)] C9 H21 O17 P3 VQSJAWPFQCXIOB-BYMOGYCESA-N | |||
SO4 Query on SO4 | B [auth A], C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
PO4 Query on PO4 | E [auth A], F [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
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a = 56.02 | α = 90 |
b = 126.947 | β = 90 |
c = 351.87 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
DENZO | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |