6MYG | pdb_00006myg

Mouse Gamma S Crystallin L16 Octamer

PDB DOI: https://doi.org/10.2210/pdb6MYG/pdb

Classification: PROTEIN BINDING
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2018-11-01 Released: 2018-11-14
Deposition Author(s): Sagar, V., Wistow, G.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.92 Å
R-Value Free:
0.284 (Depositor), 0.282 (DCC)
R-Value Work:
0.205 (Depositor)
R-Value Observed:
0.209 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 6MYG

This is version 1.1 of the entry. See complete history.

Literature

Disulfides, domain swaps and disorder in a gamma-crystallin: A model for mechanisms of aggregation in globular proteins.

Sagar, V., Wistow, G.J.

To be published.

Macromolecule Content

Total Structure Weight: 83.45 kDa
Atom Count: 5,503
Modeled Residue Count: 700
Deposited Residue Count: 712
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Gamma-crystallin S	A [auth B], B [auth A], C, D	178	Mus musculus	Mutation(s): 0 Gene Names: Crygs
UniProt & NIH Common Fund Data Resources
Find proteins for O35486 (Mus musculus) Explore O35486 Go to UniProtKB: O35486
IMPC: MGI:1298216
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	O35486
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.92 Å
R-Value Free: 0.284 (Depositor), 0.282 (DCC)
R-Value Work: 0.205 (Depositor)
R-Value Observed: 0.209 (Depositor)

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 61.095	α = 90
b = 77.591	β = 90
c = 154.052	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2018-11-14

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2018-11-14
Type: Initial release
Version 1.1: 2024-11-13
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.