Expanding the Substrate Specificity of Macro Domains toward 3''-Isomer of O-Acetyl-ADP-ribose
Chiu, Y.C., Tseng, M.C., Hsu, C.H.(2021) ACS Catal 11: 11075-11090
Experimental Data Snapshot
Starting Model: experimental
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(2021) ACS Catal 11: 11075-11090
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ADP-ribose 1''-phosphate phosphatase | 180 | Saccharomyces cerevisiae S288C | Mutation(s): 1  Gene Names: POA1, YBR022W, YBR0304 EC: 3.1.3.84 (PDB Primary Data), 3.2.2 (PDB Primary Data) | ||
UniProt | |||||
Find proteins for P38218 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P38218  Go to UniProtKB:  P38218 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P38218 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
APR (Subject of Investigation/LOI) Query on APR | B [auth A] | ADENOSINE-5-DIPHOSPHORIBOSE C15 H23 N5 O14 P2 SRNWOUGRCWSEMX-KEOHHSTQSA-N | |||
CXS Query on CXS | C [auth A] | 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID C9 H19 N O3 S PJWWRFATQTVXHA-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 82.429 | α = 90 |
b = 82.429 | β = 90 |
c = 52.588 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Ministry of Science and Technology (Taiwan) | Taiwan | 108-2628-B-002-013 |
Ministry of Science and Technology (Taiwan) | Taiwan | 108-2113-M-002-011 |