Crystal structure of human Dishevelled1 PDZ domain with its inhibitor NPL3009
Yasukochi, S., Numoto, N., Tenno, N., Tenno, T., Ito, N., Hiroaki, H.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Segment polarity protein dishevelled homolog DVL-1 | 102 | Homo sapiens | Mutation(s): 2  Gene Names: DVL1 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O14640 (Homo sapiens) Explore O14640  Go to UniProtKB:  O14640 | |||||
PHAROS:  O14640 GTEx:  ENSG00000107404  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O14640 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
E83 (Subject of Investigation/LOI) Query on E83 | B [auth A] | 2-[[3-[(2E)-2-[1,3-bis(oxidanylidene)-1-phenyl-butan-2-ylidene]hydrazinyl]phenyl]sulfonylamino]benzoic acid C23 H19 N3 O6 S SOWABNTWBBBOPH-NJNXFGOHSA-N | |||
SO4 Query on SO4 | C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
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a = 85.375 | α = 90 |
b = 85.375 | β = 90 |
c = 46.167 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |