6L7E | pdb_00006l7e

Toxin Complex TcdA1-TcdB1-TccC2

• PDB DOI: https://doi.org/10.2210/pdb6L7E/pdb
• EM Map EMD-0843: EMDB EMDataResource

• Classification: TOXIN
• Organism(s): Photorhabdus luminescens
• Expression System: Escherichia coli K-12
• Mutation(s): No 


• Deposited: 2019-11-01 Released: 2020-11-04 
• Deposition Author(s): Yan, Z.F., Yang, G.W.

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Toxin Complex TcdA1-TcdB1-TccC2

Yan, Z.F., Zhang, N., Yang, G.W.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C5  (Explore in 3D)
Global Stoichiometry: Homo 5-mer - A5 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 1,416.15 kDa 
• Atom Count: 97,400 
• Modeled Residue Count: 12,270 
• Deposited Residue Count: 12,580 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
TcdA1	A, B, C, D, E	2,516	Photorhabdus luminescens	Mutation(s): 0  Gene Names: tcdA, tcdA1
UniProt
Find proteins for Q9RN43 (Photorhabdus luminescens) Explore Q9RN43  Go to UniProtKB:  Q9RN43

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.20 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-11-04 
Deposition Author(s): Yan, Z.F., Yang, G.W.

Revision History  

• Version 1.0: 2020-11-04
  Type: Initial release
  
• Version 1.1: 2024-03-27
  Changes: Data collection, Database references