6KU9 | pdb_00006ku9

Structure of the African swine fever virus major capsid protein p72

PDB DOI: https://doi.org/10.2210/pdb6KU9/pdb
EM Map EMD-0776: EMDB EMDataResource

Classification: VIRAL PROTEIN
Organism(s): African swine fever virus
Expression System: Homo sapiens
Mutation(s): No

Deposited: 2019-08-31 Released: 2019-09-25
Deposition Author(s): Liu, Q., Xiang, Y.
Funding Organization(s): National Natural Science Foundation of China

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 6KU9

This is version 1.3 of the entry. See complete history.

Literature

Structure of the African swine fever virus major capsid protein p72.

Liu, Q., Ma, B., Qian, N., Zhang, F., Tan, X., Lei, J., Xiang, Y.

(2019) Cell Res 29: 953-955

PubMed: 31530894 Search on PubMed Search on PubMed Central
DOI: https://doi.org/10.1038/s41422-019-0232-x
Primary Citation Related Structures:
6KU9

Organizational Affiliation

Beijing Advanced Innovation Center for Structural Biology, Beijing Frontier Research Center for Biological Structure, Center for Infectious Disease Research, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.

Macromolecule Content

Total Structure Weight: 236.79 kDa
Atom Count: 11,739
Modeled Residue Count: 1,461
Deposited Residue Count: 2,079
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
B646L	A, B, C	693	African swine fever virus	Mutation(s): 0 Gene Names: p72, B646L, B646L CDS, ASFV-Georgia_4-106
UniProt
Find proteins for P22776 (African swine fever virus (strain Badajoz 1971 Vero-adapted)) Explore P22776 Go to UniProtKB: P22776
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P22776
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2019-09-25

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China	China	--

Revision History (Full details and data files)

Version 1.0: 2019-09-25
Type: Initial release
Version 1.1: 2019-11-06
Changes: Data collection, Other
Version 1.2: 2019-11-20
Changes: Database references
Version 1.3: 2024-03-27
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.