K2U bound crystal structure of class I type b peptide deformylase from Acinetobacter baumannii
Lee, I.H., Ho, T.H., Kang, L.W.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptide deformylase | A [auth B], B [auth A] | 159 | Acinetobacter baumannii | Mutation(s): 0  Gene Names:  def_1, def, def2, def_2, ABUW_2937, APD06_18825, BWP00_08140, C2U32_01090, CBI29_01007, DCD77_14985... EC: 3.5.1.88 | ![]() |
UniProt | |||||
Find proteins for A0A098SKQ8 (Acinetobacter baumannii) Explore A0A098SKQ8  Go to UniProtKB:  A0A098SKQ8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A098SKQ8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
K2U Query on K2U | D [auth B], F [auth A] | (3~{R},4~{R})-4-oxidanyl-3-(phenylmethyl)-4-(phenylmethylsulfanyl)butanoic acid C18 H20 O3 S OBXQOECJZPGJTO-SJLPKXTDSA-N | |||
ZN Query on ZN | C [auth B], E [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 41.072 | α = 90 |
b = 76.755 | β = 90 |
c = 96.503 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-2000 | data scaling |
HKL-2000 | data collection |
HKL-2000 | data reduction |
MOLREP | phasing |