Crystal structure of the AtWRKY2 domain
Xu, Y.P., Xu, H., Wang, B., Su, X.D.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Probable WRKY transcription factor 2 | A [auth B], D [auth F] | 82 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: WRKY2, At5g56270, K24C1.9, MXK23.1 | |
UniProt | |||||
Find proteins for Q9FG77 (Arabidopsis thaliana) Explore Q9FG77  Go to UniProtKB:  Q9FG77 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9FG77 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3') | B [auth C], E [auth G] | 15 | Arabidopsis thaliana | ||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3') | C [auth D], F [auth H] | 15 | Arabidopsis thaliana | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | G [auth B], H [auth F] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 38.1 | α = 93.7 |
b = 48.3 | β = 87.3 |
c = 69.1 | γ = 97.5 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |
PHENIX | model building |
Funding Organization | Location | Grant Number |
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National Natural Science Foundation of China | China | 31670740 |